U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AT1G02110 bZIP domain class transcription factor (DUF630 and DUF632) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839234, updated on 15-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
AT1G02110
Gene description
bZIP domain class transcription factor (DUF630 and DUF632)
Primary source
Araport:AT1G02110
Locus tag
AT1G02110
See related
TAIR:AT1G02110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T7I23.5; T7I23_5
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AT1G02110 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (392831..395528)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Proteasome component (PCI) domain protein Neighboring gene Leucine carboxyl methyltransferase Neighboring gene GRAM domain family protein Neighboring gene RAS 5 Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_100091.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
bZIP domain class transcription factor (DUF630 and DUF632)
NP_171713.2
  • Protein of unknown function (DUF630 and DUF632); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT3G60320.1); Has 861 Blast hits to 735 proteins in 117 species: Archae - 0; Bacteria - 21; Metazoa - 78; Fungi - 83; Plants - 611; Viruses - 12; Other Eukaryotes - 56 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    392831..395528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100091.3 → NP_171713.2  bZIP domain class transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171713.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WFK6, A0A5S9S6L5, Q56W45
    Conserved Domains (2) summary
    pfam04782
    Location:272 → 573
    DUF632; Protein of unknown function (DUF632)
    pfam04783
    Location:1 → 59
    DUF630; Protein of unknown function (DUF630)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools