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SOT17 sulfotransferase 17 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838440, updated on 18-Sep-2024

Summary

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Official Symbol
SOT17
Official Full Name
sulfotransferase 17
Primary source
TAIR:AT1G18590
Locus tag
AT1G18590
See related
Araport:AT1G18590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS SULFOTRANSFERASE 5C; ATSOT17; ATST5C; F25I16.7; F25I16_7; sulfotransferase 17; SULFOTRANSFERASE 17
Summary
encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (6398531..6400029)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myb domain protein 51 Neighboring gene galacturonosyltransferase 11 Neighboring gene RHOMBOID-like protein 12 Neighboring gene Galactose oxidase/kelch repeat superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Kinetics and substrate specificities of desulfo-glucosinolate sulfotransferases in Arabidopsis thaliana. Klein M, et al. Physiol Plant, 2009 Feb. PMID 19077143
  2. Desulfoglucosinolate sulfotransferases from Arabidopsis thaliana catalyze the final step in the biosynthesis of the glucosinolate core structure. Piotrowski M, et al. J Biol Chem, 2004 Dec 3. PMID 15358770
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtSOT17 showed an increased specific activity with increasing chain length of ds-Gl derived from methionine.
    Title: Kinetics and substrate specificities of desulfo-glucosinolate sulfotransferases in Arabidopsis thaliana.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

NM_101717.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables desulfoglucosinolate sulfotransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within glucosinolate biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
sulfotransferase 17
NP_173294.1
  • sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6398531..6400029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101717.3 → NP_173294.1  sulfotransferase 17 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173294.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FZ80
    UniProtKB/TrEMBL
    A0A178WDI6, A0A384KIF3, M1FZP1, M1FZV5
    Conserved Domains (1) summary
    PLN02164
    Location:1 → 346
    PLN02164; sulfotransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FZ80.1

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