mtHsc70-1 mitochondrial heat shock protein 70-1 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Gene symbol: mtHsc70-1
Gene description: mitochondrial heat shock protein 70-1
Primary source: Araport:AT4G37910
Locus tag: AT4G37910
See related: TAIR:AT4G37910
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F20D10.30; F20D10_30; mitochondrial heat shock protein 70-1
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Genomic context

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See mtHsc70-1 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 7

Sequence:: Chromosome: 4; NC_003075.7 (17824777..17828192, complement)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Arabidopsis mtHSC70-1 plays important roles in the establishment of COX-dependent respiration and redox homeostasis.
Title: Arabidopsis mtHSC70-1 plays important roles in the establishment of COX-dependent respiration and redox homeostasis.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_119952.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables ATP binding	HDA more info	PubMed
enables ATP-dependent protein folding chaperone	IEA Inferred from Electronic Annotation more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables unfolded protein binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	HDA more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within cytochrome complex assembly	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within intracellular auxin homeostasis	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in protein folding	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein folding	TAS Traceable Author Statement more info	PubMed
NOT involved_in response to heat	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
NOT located_in Golgi apparatus	RCA inferred from Reviewed Computational Analysis more info	PubMed
located_in cytosol	HDA more info	PubMed
NOT located_in cytosol	RCA inferred from Reviewed Computational Analysis more info	PubMed
located_in mitochondrial matrix	TAS Traceable Author Statement more info	PubMed
located_in mitochondrion	HDA more info	PubMed
located_in mitochondrion	ISM Inferred from Sequence Model more info
located_in plant-type cell wall	HDA more info	PubMed
located_in plant-type vacuole	HDA more info	PubMed
located_in plasma membrane	HDA more info	PubMed

General protein information

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Preferred Names: mitochondrial heat shock protein 70-1

NP_195504.2

mitochondrial heat shock protein 70-1 (mtHsc70-1); FUNCTIONS IN: zinc ion binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress; LOCATED IN: mitochondrion, cell wall, plasma membrane, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial HSO70 2 (TAIR:AT5G09590.1); Has 34941 Blast hits to 34814 proteins in 4850 species: Archae - 159; Bacteria - 17270; Metazoa - 3545; Fungi - 1638; Plants - 1233; Viruses - 309; Other Eukaryotes - 10787 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

17824777..17828192 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001342461.1 → NP_001328002.1 mitochondrial heat shock protein 70-1 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q56WU4, Q8GUM2, Q9SZJ3

UniProtKB/TrEMBL

A0A178V4S0, A0A5S9XZK5, A0A7G2F3S0

Conserved Domains (2) summary

PRK00290
Location:54 → 646

dnaK; molecular chaperone DnaK; Provisional

cl00881
Location:1 → 64

SQR_QFR_TM; Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, transmembrane subunits; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol, while QFR catalyzes the reverse reaction. SQR, ...
NM_119952.4 → NP_195504.2 mitochondrial heat shock protein 70-1 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_195504.2

Status: REVIEWED

UniProtKB/Swiss-Prot

Q56WU4, Q8GUM2, Q9SZJ3

UniProtKB/TrEMBL

A0A178V4S0, A0A5S9XZK5, A0A7G2F3S0

Conserved Domains (2) summary

PRK00290
Location:54 → 646

dnaK; molecular chaperone DnaK; Provisional

cl00881
Location:1 → 64

SQR_QFR_TM; Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, transmembrane subunits; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol, while QFR catalyzes the reverse reaction. SQR, ...