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MEE44 Nucleotidyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828214, updated on 7-Sep-2023

Summary

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Gene symbol
MEE44
Gene description
Nucleotidyltransferase family protein
Primary source
Araport:AT4G00060
Locus tag
AT4G00060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6N15.10; F6N15_10; maternal effect embryo arrest 44
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Genomic context

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See MEE44 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
18
Sequence:
Chromosome: 4; NC_003075.7 (21351..29064)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Chalcone and stilbene synthase family protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
  2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001340228.1
NM_001340229.1
NM_001340230.1
NM_116223.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within embryo development ending in seed dormancy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Nucleotidyltransferase family protein
NP_191917.3
  • maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    21351..29064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116223.4 → NP_191917.3  Nucleotidyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191917.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UXB2, F4JH01
    Conserved Domains (1) summary
    COG5260
    Location:1113 → 1478
    TRF4; DNA polymerase sigma [Replication, recombination and repair]

  2. NM_001340228.1 → NP_001328570.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B522

  3. NM_001340229.1 → NP_001328569.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UXB2, F4JH01
    Conserved Domains (1) summary
    COG5260
    Location:1113 → 1478
    TRF4; DNA polymerase sigma [Replication, recombination and repair]

  4. NM_001340230.1 → NP_001328568.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UXB2, F4JH01
    Conserved Domains (1) summary
    COG5260
    Location:1113 → 1478
    TRF4; DNA polymerase sigma [Replication, recombination and repair]
Nucleotide Protein
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