U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NPL41 NPL4-like protein 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825475, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
NPL41
Official Full Name
NPL4-like protein 1
Primary source
TAIR:AT3G63000
Locus tag
AT3G63000
See related
Araport:AT3G63000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
NPL4-like protein 1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (23283592..23285540)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box/RNI-like superfamily protein Neighboring gene myelin transcription factor-like protein Neighboring gene tRNA-Ala Neighboring gene tRNA-Ala

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_116165.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
NPL4-like protein 1
NP_191859.1
  • NPL4-like protein 1 (NPL41); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NPL4 (InterPro:IPR007717); BEST Arabidopsis thaliana protein match is: Nuclear pore localisation protein NPL4 (TAIR:AT2G47970.1); Has 398 Blast hits to 398 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 123; Plants - 67; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    23283592..23285540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116165.4 → NP_191859.1  NPL4-like protein 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191859.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LYC2
    UniProtKB/TrEMBL
    A0A178VMB6, A0A5S9XN91, A0A654FK88
    Conserved Domains (2) summary
    cd08061
    Location:120 → 375
    MPN_NPL4; Mov34/MPN/PAD-1 family: nuclear protein localization-4 (Npl4) domain
    cd17055
    Location:3 → 85
    Ubl_AtNPL4_like; ubiquitin-like (Ubl) domain found in Arabidopsis thaliana NPL4-like proteins NPL4-1, NPL4-2, and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LYC2.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools