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PIP5K9 phosphatidyl inositol monophosphate 5 kinase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820151, updated on 18-Sep-2024

Summary

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Official Symbol
PIP5K9
Official Full Name
phosphatidyl inositol monophosphate 5 kinase
Primary source
TAIR:AT3G09920
Locus tag
AT3G09920
See related
Araport:AT3G09920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
phosphatidyl inositol monophosphate 5 kinase
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Genomic context

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See PIP5K9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_003074.8 (3038780..3044989, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene RAB GTPase homolog E1E Neighboring gene RAB GTPase homolog C2B Neighboring gene miscRNA Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene induced by phosphate starvation1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered K(+) efflux in Arabidopsis roots. Zarza X, et al. Plant J, 2020 Oct. PMID 32666545, Free PMC Article
  2. PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth. Lou Y, et al. Plant Cell, 2007 Jan. PMID 17220200, Free PMC Article
  3. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered K(+) efflux in Arabidopsis roots.
    Title: Lipid kinases PIP5K7 and PIP5K9 are required for polyamine-triggered K(+) efflux in Arabidopsis roots.
  2. PIP5K9 interacts with CINV1 to negatively regulate sugar-mediated root cell elongation.
    Title: PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001035589.3
NM_001202923.1
NM_001337850.1
NM_111827.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within carbohydrate metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
phosphatidyl inositol monophosphate 5 kinase
NP_001030666.1
  • phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001189852.1
  • phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1).
NP_187603.1
  • phosphatidyl inositol monophosphate 5 kinase (PIP5K9); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: carbohydrate metabolic process, cellular amino acid metabolic process; LOCATED IN: cytosol, nucleus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G60890.1); Has 25974 Blast hits to 7709 proteins in 605 species: Archae - 0; Bacteria - 3692; Metazoa - 3999; Fungi - 475; Plants - 1866; Viruses - 0; Other Eukaryotes - 15942 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3038780..3044989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202923.1 → NP_001189852.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189852.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WMK5, Q8L850, Q9SF93
    UniProtKB/TrEMBL
    A0A5S9XAU0, A0A654FG69
    Conserved Domains (1) summary
    PLN03185
    Location:48 → 810
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  2. NM_001337850.1 → NP_001327647.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WMK5, Q8L850, Q9SF93
    UniProtKB/TrEMBL
    A0A5S9XAU0, A0A654FG69
    Conserved Domains (1) summary
    PLN03185
    Location:48 → 810
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  3. NM_001035589.3 → NP_001030666.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030666.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WMK5, Q8L850, Q9SF93
    UniProtKB/TrEMBL
    A0A5S9XAU0, A0A654FG69
    Conserved Domains (1) summary
    PLN03185
    Location:48 → 810
    PLN03185; phosphatidylinositol phosphate kinase; Provisional

  4. NM_111827.3 → NP_187603.1  phosphatidyl inositol monophosphate 5 kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187603.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WMK5, Q8L850, Q9SF93
    UniProtKB/TrEMBL
    A0A5S9XAU0, A0A654FG69
    Conserved Domains (1) summary
    PLN03185
    Location:48 → 810
    PLN03185; phosphatidylinositol phosphate kinase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L850.2

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