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PAS_chr4_0231 Putative nucleolar DEAD box RNA helicase [ Komagataella phaffii GS115 ]

Gene ID: 8200902, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0231
Gene description
Putative nucleolar DEAD box RNA helicase
Locus tag
PAS_chr4_0231
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (467913..470213)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Hypothetical protein Neighboring gene Protein with carboxyl methyl esterase activity Neighboring gene Glutamine-dependent NAD(+) synthetase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Putative nucleolar DEAD box RNA helicase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    467913..470213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493596.1 → XP_002493641.1  Putative nucleolar DEAD box RNA helicase [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493641.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R787, F2QZV1
    Conserved Domains (1) summary
    COG0513
    Location:42 → 534
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
Nucleotide Protein
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