U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ribosomal L29e protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819855, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Ribosomal L29e protein family
Primary source
TAIR:AT3G06700
Locus tag
AT3G06700
See related
Araport:AT3G06700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (2117127..2118074, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal L29e protein family Neighboring gene putative acyl-coenzyme A oxidase Neighboring gene E3 ubiquitin ligase Neighboring gene importin alpha isoform 1 Neighboring gene Thioredoxin z

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article
  2. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Pendle AF, et al. Mol Biol Cell, 2005 Jan. PMID 15496452, Free PMC Article
  3. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001035573.2
NM_001035574.2
NM_111550.5

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
part_of cytosolic large ribosomal subunit HDA PubMed 
located_in nucleolus HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Ribosomal L29e protein family
NP_001030650.1
  • Ribosomal L29e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29e (InterPro:IPR002673); BEST Arabidopsis thaliana protein match is: Ribosomal L29e protein family (TAIR:AT3G06680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001030651.1
  • Ribosomal L29e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29e (InterPro:IPR002673); BEST Arabidopsis thaliana protein match is: Ribosomal L29e protein family (TAIR:AT3G06680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_187326.1
  • Ribosomal L29e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29e (InterPro:IPR002673); BEST Arabidopsis thaliana protein match is: Ribosomal L29e protein family (TAIR:AT3G06680.1); Has 764 Blast hits to 764 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 113; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2117127..2118074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111550.5 → NP_187326.1  Ribosomal L29e protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187326.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M7X7
    UniProtKB/TrEMBL
    A0A178VM37, A0A5S9X9S6
    Conserved Domains (1) summary
    pfam01779
    Location:4 → 42
    Ribosomal_L29e; Ribosomal L29e protein family

  2. NM_001035574.2 → NP_001030651.1  Ribosomal L29e protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030651.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M7X7
    UniProtKB/TrEMBL
    A0A178VM37, A0A5S9X9S6
    Conserved Domains (1) summary
    pfam01779
    Location:4 → 42
    Ribosomal_L29e; Ribosomal L29e protein family

  3. NM_001035573.2 → NP_001030650.1  Ribosomal L29e protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030650.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M7X7
    UniProtKB/TrEMBL
    A0A178VM37, A0A5S9X9S6
    Conserved Domains (1) summary
    pfam01779
    Location:4 → 42
    Ribosomal_L29e; Ribosomal L29e protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M7X7.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools