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CALML3 calmodulin like 3 [ Homo sapiens (human) ]

Gene ID: 810, updated on 1-Mar-2024

Summary

Official Symbol
CALML3provided by HGNC
Official Full Name
calmodulin like 3provided by HGNC
Primary source
HGNC:HGNC:1452
See related
Ensembl:ENSG00000178363 MIM:114184; AllianceGenome:HGNC:1452
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CLP
Summary
Predicted to enable calcium ion binding activity and enzyme regulator activity. Predicted to be involved in regulation of catalytic activity. Located in extracellular exosome. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See CALML3 in Genome Data Viewer
Location:
10p15.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (5524961..5526771)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (5528229..5530040)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (5566924..5568734)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2079 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_13203 Neighboring gene neuroepithelial cell transforming 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_13225 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2080 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5509025-5509661 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5511491-5512062 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5512063-5512634 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5512635-5513206 Neighboring gene CRISPRi-validated cis-regulatory element chr10.219 Neighboring gene CRISPRi-validated cis-regulatory element chr10.222 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:5535211-5535389 Neighboring gene Sharpr-MPRA regulatory region 10902 Neighboring gene calmodulin like 5 Neighboring gene CALML3 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5567229-5567928 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5567929-5568629 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5581099-5581598 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5588335-5588834 Neighboring gene uncharacterized LOC105376380 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5595464-5595987 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:5595988-5596510 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:5599714-5600036 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:5602693-5603194 Neighboring gene uncharacterized LOC105376381 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:5605907-5606133

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
calmodulin-like protein 3
Names
caM-like protein
calmodulin-related protein NB-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_005185.4NP_005176.1  calmodulin-like protein 3

    See identical proteins and their annotated locations for NP_005176.1

    Status: VALIDATED

    Source sequence(s)
    AL732437, BC031889, CU454493, DR421766, HY060230
    Consensus CDS
    CCDS7069.1
    UniProtKB/Swiss-Prot
    B2R9V6, P27482, Q5SQI4
    Related
    ENSP00000315299.1, ENST00000315238.3
    Conserved Domains (1) summary
    PTZ00184
    Location:1149
    PTZ00184; calmodulin; Provisional

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    5524961..5526771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    5528229..5530040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)