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LOC8077042 cytochrome P450 98A1 [ Sorghum bicolor (sorghum) ]

Gene ID: 8077042, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8077042
Gene description
cytochrome P450 98A1
Locus tag
SORBI_3009G181800
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
Also known as
CYP98A1
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (53566818..53571093)

Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase 87A2 Neighboring gene WAT1-related protein At5g07050 Neighboring gene dr1-associated corepressor homolog Neighboring gene cysteine proteinase inhibitor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning of three A-type cytochromes P450, CYP71E1, CYP98, and CYP99 from Sorghum bicolor (L.) Moench by a PCR approach and identification by expression in Escherichia coli of CYP71E1 as a multifunctional cytochrome P450 in the biosynthesis of the cyanogenic glucoside dhurrin. Bak S, et al. Plant Mol Biol, 1998 Feb. PMID 9484480

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome P450 98A1
Names
cytochrome P450 CYP98A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001424088.1 → NP_001411017.1  cytochrome P450 98A1

    Status: VALIDATED

    Source sequence(s)
    AF029856, CD208021, CD208941
    UniProtKB/Swiss-Prot
    O48956
    UniProtKB/TrEMBL
    A0A921QBE0, C5Z0A1

RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    53566818..53571093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002439956.2 → XP_002440001.1  cytochrome P450 98A1

    UniProtKB/Swiss-Prot
    O48956
    UniProtKB/TrEMBL
    C5Z0A1
    Conserved Domains (1) summary
    cd20656
    Location:62 → 493
    CYP98; cytochrome P450 family 98
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O48956.1 GenPept UniProtKB/Swiss-Prot:O48956

Gene LinkOut

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Molecular Biology Databases
Research Materials