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LOC8075120 acyl-coenzyme A oxidase 4, peroxisomal [ Sorghum bicolor (sorghum) ]

Gene ID: 8075120, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8075120
Gene description
acyl-coenzyme A oxidase 4, peroxisomal
Locus tag
SORBI_3003G061800
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 3 NC_012872.2 (5406085..5411281)

Chromosome 3 - NC_012872.2Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH51 Neighboring gene late embryogenesis abundant protein EMB564 Neighboring gene uncharacterized LOC110433392 Neighboring gene E3 ubiquitin-protein ligase MBR2 Neighboring gene fasciclin-like arabinogalactan protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012872.2 Chromosome 3 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A oxidase 4, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012872.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    5406085..5411281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002455115.2 → XP_002455160.2  acyl-coenzyme A oxidase 4, peroxisomal

    UniProtKB/TrEMBL
    A0A1B6Q1M9, A0A921ULC6
    Conserved Domains (1) summary
    PLN02526
    Location:25 → 437
    PLN02526; acyl-coenzyme A oxidase
Nucleotide Protein
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