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LOC8059399 carbonyl reductase [NADPH] 1 [ Sorghum bicolor (sorghum) ]

Gene ID: 8059399, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8059399
Gene description
carbonyl reductase [NADPH] 1
Locus tag
SORBI_3003G413100
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8059399 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 3 NC_012872.2 (72033243..72035844, complement)

Chromosome 3 - NC_012872.2Genomic Context describing neighboring genes Neighboring gene photosynthetic NDH subunit of subcomplex B 5, chloroplastic Neighboring gene wall-associated receptor kinase-like 20 Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene retinol dehydrogenase 12-like Neighboring gene uncharacterized LOC8081304

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012872.2 Chromosome 3 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonyl reductase [NADPH] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012872.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    72033243..72035844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002458983.2 → XP_002459028.1  carbonyl reductase [NADPH] 1

    See identical proteins and their annotated locations for XP_002459028.1

    UniProtKB/TrEMBL
    A0A921RID9, C5XH11
    Conserved Domains (2) summary
    cd05324
    Location:43 → 324
    carb_red_PTCR-like_SDR_c; Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs
    pfam00106
    Location:43 → 285
    adh_short; short chain dehydrogenase
Nucleotide Protein
Heading Accession and Version

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