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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001128843.2 → NP_001122315.2 TNFAIP3-interacting protein 3 isoform 2
See identical proteins and their annotated locations for NP_001122315.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and initiates translation at an alternate start codon, and lacks an exon in the 3' coding region which results in a frameshift compared to variant 1. The encoded protein (isoform 2) has distinct N- and C-termini and is longer than isoform 1.
- Source sequence(s)
-
AC105254, AK301058, DC389224
- Consensus CDS
-
CCDS58925.1
- UniProtKB/Swiss-Prot
-
Q96KP6
- Related
- ENSP00000427106.1, ENST00000507879.5
- Conserved Domains (2) summary
-
- cd09803
Location:227 → 313
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- pfam05010
Location:173 → 332
- TACC; Transforming acidic coiled-coil-containing protein (TACC)
-
NM_001244764.2 → NP_001231693.1 TNFAIP3-interacting protein 3 isoform 3
See identical proteins and their annotated locations for NP_001231693.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and initiates translation at an alternate start codon, and lacks an exon in the 3' coding region which results in a frameshift compared to variant 1. The encoded protein (isoform 3) has distinct N- and C-termini and is longer than isoform 1.
- Source sequence(s)
-
AC105254, AC108027, AK303192
- Consensus CDS
-
CCDS58926.1
- UniProtKB/Swiss-Prot
-
Q96KP6
- Related
- ENSP00000426613.1, ENST00000509841.1
- Conserved Domains (2) summary
-
- cd09803
Location:234 → 320
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- pfam05010
Location:180 → 339
- TACC; Transforming acidic coiled-coil-containing protein (TACC)
-
NM_024873.6 → NP_079149.3 TNFAIP3-interacting protein 3 isoform 1
See identical proteins and their annotated locations for NP_079149.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the shortest transcript and encodes the shortest protein (isoform 1).
- Source sequence(s)
-
AC105254, AK024815, AK290409, CD367219
- Consensus CDS
-
CCDS3718.1
- UniProtKB/Swiss-Prot
- Q96KP6, Q9H780
- Related
- ENSP00000057513.3, ENST00000057513.8
- Conserved Domains (2) summary
-
- cd09803
Location:157 → 243
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- pfam05010
Location:103 → 262
- TACC; Transforming acidic coiled-coil-containing protein (TACC)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
121131408..121227483 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047416182.1 → XP_047272138.1 TNFAIP3-interacting protein 3 isoform X4
-
XM_011532257.4 → XP_011530559.1 TNFAIP3-interacting protein 3 isoform X3
- Conserved Domains (2) summary
-
- cd09803
Location:264 → 350
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- COG1196
Location:140 → 369
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_011532256.3 → XP_011530558.1 TNFAIP3-interacting protein 3 isoform X1
- Conserved Domains (2) summary
-
- cd09803
Location:264 → 350
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- pfam05010
Location:210 → 369
- TACC; Transforming acidic coiled-coil-containing protein (TACC)
-
XM_047416181.1 → XP_047272137.1 TNFAIP3-interacting protein 3 isoform X2
-
XM_017008625.3 → XP_016864114.2 TNFAIP3-interacting protein 3 isoform X5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
124435731..124531810 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)