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KLF3-AS1 KLF3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 79667, updated on 14-May-2022

Summary

Official Symbol
KLF3-AS1provided by HGNC
Official Full Name
KLF3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:25796
See related
AllianceGenome:HGNC:25796
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in ovary (RPKM 5.9), endometrium (RPKM 4.7) and 25 other tissues See more
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Genomic context

See KLF3-AS1 in Genome Data Viewer
Location:
4p14
Exon count:
17
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (38599093..38664893, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (38568181..38633994, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (38600714..38666514, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1258 Neighboring gene long intergenic non-protein coding RNA 1259 Neighboring gene long intergenic non-protein coding RNA 2278 Neighboring gene KLF transcription factor 3 Neighboring gene uncharacterized LOC105374413 Neighboring gene RNA, 5S ribosomal pseudogene 158

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

General gene information

Markers

Clone Names

  • FLJ13197

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026804.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC021860
  2. NR_171644.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC021860

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    38599093..38664893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    38568181..38633994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_024614.1: Suppressed sequence

    Description
    NM_024614.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.