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CDC42SE2 CDC42 small effector 2 [ Bos taurus (cattle) ]

Gene ID: 789618, updated on 13-Apr-2024

Summary

Official Symbol
CDC42SE2provided by VGNC
Official Full Name
CDC42 small effector 2provided by VGNC
Primary source
VGNC:VGNC:27078
See related
BGD:BT12553; Ensembl:ENSBTAG00000005961
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (23073267..23192776, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene Rap guanine nucleotide exchange factor 6 Neighboring gene nucleophosmin-like Neighboring gene microRNA mir-12018 Neighboring gene uncharacterized LOC112447380 Neighboring gene LYR motif containing 7

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

General gene information

Markers

Clone Names

  • MGC166112

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
CDC42 small effector protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102537.1NP_001096007.1  CDC42 small effector protein 2

    See identical proteins and their annotated locations for NP_001096007.1

    Status: PROVISIONAL

    Source sequence(s)
    BC147986
    UniProtKB/Swiss-Prot
    A6QLJ4
    Related
    ENSBTAP00000047577.2, ENSBTAT00000052263.3
    Conserved Domains (1) summary
    cd00132
    Location:2767
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    23073267..23192776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059888485.1XP_059744468.1  CDC42 small effector protein 2 isoform X4

  2. XM_024994719.2XP_024850487.2  CDC42 small effector protein 2 isoform X3

  3. XM_024994718.2XP_024850486.2  CDC42 small effector protein 2 isoform X2

  4. XM_059888484.1XP_059744467.1  CDC42 small effector protein 2 isoform X2

  5. XM_059888483.1XP_059744466.1  CDC42 small effector protein 2 isoform X1

  6. XM_059888486.1XP_059744469.1  CDC42 small effector protein 2 isoform X5