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SPATA21 spermatogenesis associated 21 [ Bos taurus (domestic cattle) ]

Gene ID: 789347, updated on 17-Aug-2024

Summary

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Official Symbol
SPATA21provided by VGNC
Official Full Name
spermatogenesis associated 21provided by VGNC
Primary source
VGNC:VGNC:56149
See related
BGD:BT12840; Ensembl:ENSBTAG00000013281
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (135693950..135736523)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene ciliary rootlet coiled-coil, rootletin Neighboring gene NECAP endocytosis associated 2 Neighboring gene SUZ RNA binding domain containing 1 Neighboring gene uncharacterized LOC112443502 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene F-box protein 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-associated protein 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    135693950..135736523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059880258.1 → XP_059736241.1  spermatogenesis-associated protein 21 isoform X1

  2. XM_059880263.1 → XP_059736246.1  spermatogenesis-associated protein 21 isoform X2

  3. XM_059880264.1 → XP_059736247.1  spermatogenesis-associated protein 21 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LMZ1
    Related
    ENSBTAP00000058293.2, ENSBTAT00000069209.2
Nucleotide Protein Strain
Heading Accession and Version

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