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Celf3 CUGBP, Elav-like family member 3 [ Mus musculus (house mouse) ]

Gene ID: 78784, updated on 18-Apr-2024

Summary

Official Symbol
Celf3provided by MGI
Official Full Name
CUGBP, Elav-like family member 3provided by MGI
Primary source
MGI:MGI:1926034
See related
Ensembl:ENSMUSG00000028137 AllianceGenome:MGI:1926034
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CAGH4; ERDA4; ETR-1; Tnrc4; BRUNOL1; 4930415M08Rik
Summary
Enables 7SK snRNA binding activity. Acts upstream of or within several processes, including flagellated sperm motility; ncRNA transcription; and nuclear body organization. Located in cytoplasm and nuclear body. Is expressed in several structures, including adrenal medulla; gut; nervous system; neural retina; and nose. Orthologous to human CELF3 (CUGBP Elav-like family member 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in whole brain E14.5 (RPKM 85.2), CNS E14 (RPKM 68.5) and 8 other tissues See more
Orthologs
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Genomic context

Location:
3 F2.1; 3 40.73 cM
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (94385581..94405822)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (94478285..94496786)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2-like Neighboring gene STARR-positive B cell enhancer mm9_chr3:94260392-94260693 Neighboring gene mitochondrial ribosomal protein L9 Neighboring gene regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 Neighboring gene sorting nexin family member 27 Neighboring gene STARR-seq mESC enhancer starr_08351 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:94386567-94386676 Neighboring gene translation machinery-associated protein 7 pseudogene Neighboring gene ribosomal protein L31, pseudogene 11

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (1)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 7SK snRNA binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables RNA binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables RNA binding ISO
Inferred from Sequence Orthology
more info
 
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear body IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
part_of ribonucleoprotein complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
CUGBP Elav-like family member 3
Names
CUG-BP- and ETR-3-like factor 3
ELAV-type RNA-binding protein 1
RNA-binding protein BRUNOL-1
VCUGBP, Elav-like family member 3
bruno-like protein 1
trinucleotide repeat containing 4
trinucleotide repeat-containing gene 4 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001289613.2NP_001276542.1  CUGBP Elav-like family member 3 isoform 1

    See identical proteins and their annotated locations for NP_001276542.1

    Status: VALIDATED

    Source sequence(s)
    BC057553, BY124225
    Consensus CDS
    CCDS79972.1
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Related
    ENSMUSP00000143344.2, ENSMUST00000200342.5
    Conserved Domains (4) summary
    PRK12323
    Location:214379
    PRK12323; DNA polymerase III subunit gamma/tau
    cd12639
    Location:405483
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:94174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  2. NM_001289616.1NP_001276545.1  CUGBP Elav-like family member 3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AK044506, BC057553, BY089288
    Consensus CDS
    CCDS79974.1
    UniProtKB/TrEMBL
    A0A0G2JDL2, A0A0G2JGE2
    Related
    ENSMUSP00000142412.2, ENSMUST00000198316.5
    Conserved Domains (3) summary
    cd12639
    Location:300378
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:20385
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:1797
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  3. NM_001289620.1NP_001276549.1  CUGBP Elav-like family member 3 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC122808, AK087536, BC057553, BY089288
    Consensus CDS
    CCDS79973.1
    UniProtKB/TrEMBL
    A0A0G2JGX2
    Related
    ENSMUSP00000143733.2, ENSMUST00000197558.5
    Conserved Domains (3) summary
    cd12635
    Location:1797
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:281359
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:112
    RRM_SF; RNA recognition motif (RRM) superfamily
  4. NM_001357784.1NP_001344713.1  CUGBP Elav-like family member 3 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC122808, BC057553
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Related
    ENSMUSP00000143532.2, ENSMUST00000199775.5
    Conserved Domains (4) summary
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:94174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:377455
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl26386
    Location:214351
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
  5. NM_001357785.1NP_001344714.1  CUGBP Elav-like family member 3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC122808, BC057553
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:21225
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:329407
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  6. NM_001357786.1NP_001344715.1  CUGBP Elav-like family member 3 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC122808, BC057553
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    cd12639
    Location:301379
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:21386
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  7. NM_001357787.1NP_001344716.1  CUGBP Elav-like family member 3 isoform 8

    Status: VALIDATED

    Source sequence(s)
    AC122808, AK019578, BC057553
    Related
    ENSMUST00000199148.5
    Conserved Domains (2) summary
    cd12639
    Location:198276
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl25887
    Location:109283
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
  8. NM_001379249.1NP_001366178.1  CUGBP Elav-like family member 3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (4) summary
    PRK12323
    Location:214379
    PRK12323; DNA polymerase III subunit gamma/tau
    cd12639
    Location:405483
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:94174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  9. NM_001379250.1NP_001366179.1  CUGBP Elav-like family member 3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/Swiss-Prot
    Q6PFH2, Q8CIN6
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (4) summary
    PRK12323
    Location:213350
    PRK12323; DNA polymerase III subunit gamma/tau
    cd12639
    Location:376454
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:93173
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  10. NM_001379251.1NP_001366180.1  CUGBP Elav-like family member 3 isoform 10

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:20224
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:328406
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1797
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  11. NM_001379252.1NP_001366181.1  CUGBP Elav-like family member 3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:21225
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:329407
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  12. NM_001379253.1NP_001366182.1  CUGBP Elav-like family member 3 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    cd12639
    Location:301379
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:21386
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  13. NM_001379254.1NP_001366183.1  CUGBP Elav-like family member 3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/TrEMBL
    A0A0G2JDL2, A0A0G2JGE2
    Conserved Domains (3) summary
    cd12639
    Location:300378
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:20385
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:1797
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  14. NM_001379255.1NP_001366184.1  CUGBP Elav-like family member 3 isoform 13

    Status: VALIDATED

    Source sequence(s)
    AC122808
    Conserved Domains (3) summary
    TIGR01628
    Location:21369
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:282360
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  15. NM_001379256.1NP_001366185.1  CUGBP Elav-like family member 3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC122808
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:21225
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:329407
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  16. NM_172434.4NP_766022.1  CUGBP Elav-like family member 3 isoform 2

    See identical proteins and their annotated locations for NP_766022.1

    Status: VALIDATED

    Source sequence(s)
    BC057553, BY124225
    Consensus CDS
    CCDS38536.1
    UniProtKB/Swiss-Prot
    Q6PFH2, Q8CIN6
    UniProtKB/TrEMBL
    A0A0G2JGE2
    Related
    ENSMUSP00000029784.6, ENSMUST00000029784.10
    Conserved Domains (4) summary
    PRK12323
    Location:213350
    PRK12323; DNA polymerase III subunit gamma/tau
    cd12639
    Location:376454
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:93173
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

RNA

  1. NR_110353.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC122808, AK030259, BC057553
    Related
    ENSMUST00000197699.5
  2. NR_151857.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC122808, BC057553

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    94385581..94405822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030252906.2XP_030108766.1  CUGBP Elav-like family member 3 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:7201
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:305383
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  2. XM_030252914.2XP_030108774.1  CUGBP Elav-like family member 3 isoform X10

    Conserved Domains (3) summary
    TIGR01628
    Location:21341
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:254332
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  3. XM_006502335.4XP_006502398.1  CUGBP Elav-like family member 3 isoform X8

    See identical proteins and their annotated locations for XP_006502398.1

    Conserved Domains (3) summary
    TIGR01628
    Location:7201
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:305383
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  4. XM_036163413.1XP_036019306.1  CUGBP Elav-like family member 3 isoform X5

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:21225
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:329407
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1898
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  5. XM_030252913.2XP_030108773.1  CUGBP Elav-like family member 3 isoform X9

    Conserved Domains (3) summary
    cd12639
    Location:277355
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:2362
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  6. XM_030252907.2XP_030108767.1  CUGBP Elav-like family member 3 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:7201
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:305383
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  7. XM_030252912.2XP_030108772.1  CUGBP Elav-like family member 3 isoform X9

    Conserved Domains (3) summary
    cd12639
    Location:277355
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:2362
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  8. XM_006502324.4XP_006502387.1  CUGBP Elav-like family member 3 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (5) summary
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:93173
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:404482
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    pfam08549
    Location:245378
    SWI-SNF_Ssr4; Fungal domain of unknown function (DUF1750)
    pfam11593
    Location:147307
    Med3; Mediator complex subunit 3 fungal
  9. XM_006502328.4XP_006502391.1  CUGBP Elav-like family member 3 isoform X4

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (4) summary
    PRK14951
    Location:194326
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:94174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:330408
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  10. XM_030252905.2XP_030108765.1  CUGBP Elav-like family member 3 isoform X7

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:20224
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:328406
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1797
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  11. XM_036163415.1XP_036019308.1  CUGBP Elav-like family member 3 isoform X8

    Conserved Domains (3) summary
    TIGR01628
    Location:7201
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:305383
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  12. XM_036163416.1XP_036019309.1  CUGBP Elav-like family member 3 isoform X9

    Conserved Domains (3) summary
    cd12639
    Location:277355
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:2362
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  13. XM_006502327.4XP_006502390.1  CUGBP Elav-like family member 3 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (5) summary
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:94174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:358436
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01659
    Location:272444
    sex-lethal; sex-lethal family splicing factor
    pfam11593
    Location:148308
    Med3; Mediator complex subunit 3 fungal
  14. XM_011240284.3XP_011238586.1  CUGBP Elav-like family member 3 isoform X3

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (5) summary
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:93173
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:357435
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01659
    Location:271443
    sex-lethal; sex-lethal family splicing factor
    pfam11593
    Location:147307
    Med3; Mediator complex subunit 3 fungal
  15. XM_030252904.2XP_030108764.1  CUGBP Elav-like family member 3 isoform X6

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (4) summary
    PRK14951
    Location:193325
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    cd12632
    Location:288
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:93173
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:329407
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  16. XM_030252911.2XP_030108771.1  CUGBP Elav-like family member 3 isoform X9

    Conserved Domains (3) summary
    cd12639
    Location:277355
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:2362
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:174
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
  17. XM_006502334.4XP_006502397.1  CUGBP Elav-like family member 3 isoform X7

    See identical proteins and their annotated locations for XP_006502397.1

    UniProtKB/TrEMBL
    A0A0G2JGE2
    Conserved Domains (3) summary
    TIGR01628
    Location:20224
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:328406
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:1797
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

RNA

  1. XR_004941415.1 RNA Sequence

  2. XR_003954425.2 RNA Sequence

    Related
    ENSMUST00000198796.5
  3. XR_003954426.2 RNA Sequence

  4. XR_003954424.2 RNA Sequence

  5. XR_004941414.1 RNA Sequence

  6. XR_001783779.3 RNA Sequence

  7. XR_375601.5 RNA Sequence

  8. XR_003954427.2 RNA Sequence

  9. XR_004941416.1 RNA Sequence