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Srxn1 sulfiredoxin 1 homolog (S. cerevisiae) [ Mus musculus (house mouse) ]

Gene ID: 76650, updated on 2-Nov-2024

Summary

Official Symbol
Srxn1provided by MGI
Official Full Name
sulfiredoxin 1 homolog (S. cerevisiae)provided by MGI
Primary source
MGI:MGI:104971
See related
Ensembl:ENSMUSG00000032802 AllianceGenome:MGI:104971
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Srx; Npn3; Srx1; TX01; 1700127B04Rik
Summary
Enables oxidoreductase activity, acting on a sulfur group of donors. Involved in response to oxidative stress. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Is expressed in adrenal medulla and embryo. Orthologous to human SRXN1 (sulfiredoxin 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in duodenum adult (RPKM 100.0), adrenal adult (RPKM 95.3) and 21 other tissues See more
Orthologs
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Genomic context

See Srxn1 in Genome Data Viewer
Location:
2 G3; 2 74.83 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (151946738..151953296)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (152105524..152111376)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene scratch family zinc finger 2 Neighboring gene STARR-seq mESC enhancer starr_06043 Neighboring gene predicted gene, 31475 Neighboring gene predicted gene, 31535 Neighboring gene transcription factor 15

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (3)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on a sulfur group of donors IDA
Inferred from Direct Assay
more info
PubMed 
enables oxidoreductase activity, acting on a sulfur group of donors ISO
Inferred from Sequence Orthology
more info
 
enables sulfiredoxin activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables sulfiredoxin activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to oxidative stress IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in response to oxidative stress IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to oxidative stress ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
sulfiredoxin-1
Names
neoplastic progression 3
neoplastic progression protein 3
XP_036018567.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029688.6NP_083964.3  sulfiredoxin-1

    Status: VALIDATED

    Source sequence(s)
    AL845161
    Consensus CDS
    CCDS16877.2
    UniProtKB/Swiss-Prot
    Q3TWN6, Q91VN5, Q9D975
    Related
    ENSMUSP00000046196.8, ENSMUST00000041500.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    151946738..151953296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036162674.1XP_036018567.1  sulfiredoxin-1 isoform X1

    UniProtKB/TrEMBL
    A2AQU8
    Conserved Domains (1) summary
    cd16395
    Location:59148
    Srx; Sulfiredoxin reactivates peroxiredoxins after oxidative inactivation