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Rbmxl2 RNA binding motif protein, X-linked-like 2 [ Mus musculus (house mouse) ]

Gene ID: 76572, updated on 26-Sep-2022

Summary

Official Symbol
Rbmxl2provided by MGI
Official Full Name
RNA binding motif protein, X-linked-like 2provided by MGI
Primary source
MGI:MGI:1923822
See related
Ensembl:ENSMUSG00000073894 AllianceGenome:MGI:1923822
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hnrnpg-t; 1700012H05Rik
Summary
Predicted to be involved in positive regulation of mRNA splicing, via spliceosome. Predicted to be part of spliceosomal complex. Is expressed in central nervous system and sensory organ. Orthologous to several human genes including RBMXL2 (RBMX like 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Rbmxl2 in Genome Data Viewer
Location:
7; 7 E3
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (106808652..106810123)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (107209445..107210916)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene NLR family, pyrin domain containing 14 Neighboring gene olfactory receptor family 2 subfamily D member 36 Neighboring gene PWP1 homolog pseudogene Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene Neighboring gene synaptotagmin IX

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
RNA-binding motif protein, X-linked-like-2
Names
testes-specific heterogenous nuclear ribonucleoprotein G-T

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029660.2NP_083936.1  RNA-binding motif protein, X-linked-like-2

    See identical proteins and their annotated locations for NP_083936.1

    Status: PROVISIONAL

    Source sequence(s)
    AK005907
    Consensus CDS
    CCDS21689.1
    UniProtKB/TrEMBL
    A0A8C6H773, Q9DAE2
    Related
    ENSMUSP00000095739.2, ENSMUST00000098135.2
    Conserved Domains (3) summary
    COG0724
    Location:981
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12382
    Location:786
    RRM_RBMX_like; RNA recognition motif in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
    pfam08081
    Location:170214
    RBM1CTR; RBM1CTR (NUC064) family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    106808652..106810123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)