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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_029337.2 → NP_083613.2 E1A-binding protein p400 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform.
- Source sequence(s)
-
AC161348
- Consensus CDS
-
CCDS19529.1
- UniProtKB/Swiss-Prot
-
Q8CHI8
- Related
- ENSMUSP00000049038.9, ENSMUST00000041558.15
- Conserved Domains (7) summary
-
- PHA03255
Location:2511 → 2639
- PHA03255; BDLF3; Provisional
- smart00573
Location:762 → 833
- HSA; domain in helicases and associated with SANT domains
- cd00046
Location:1073 → 1208
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00176
Location:1056 → 1336
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:1776 → 1892
- Helicase_C; Helicase conserved C-terminal domain
- pfam03153
Location:2822 → 3011
- TFIIA; Transcription factor IIA, alpha/beta subunit
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
-
NM_173066.1 → NP_775089.1 E1A-binding protein p400 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2), also called mDomino-S, lacks an in-frame exon, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1.
- Source sequence(s)
-
AC161348
- Consensus CDS
-
CCDS51612.1
- UniProtKB/Swiss-Prot
-
Q8CHI8
- Related
- ENSMUSP00000108055.3, ENSMUST00000112436.9
- Conserved Domains (7) summary
-
- PHA03255
Location:2475 → 2603
- PHA03255; BDLF3; Provisional
- smart00573
Location:726 → 797
- HSA; domain in helicases and associated with SANT domains
- cd00046
Location:1037 → 1172
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00176
Location:1020 → 1300
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:1740 → 1856
- Helicase_C; Helicase conserved C-terminal domain
- pfam03153
Location:2786 → 2975
- TFIIA; Transcription factor IIA, alpha/beta subunit
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
110812239..110918780 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017321133.2 → XP_017176622.1 E1A-binding protein p400 isoform X8
- Conserved Domains (7) summary
-
- smart00573
Location:762 → 833
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1406 → 1707
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1857 → 1982
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:448 → 715
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:796 → 884
- Rrp15p
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1053 → 1269
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_030254870.1 → XP_030110730.1 E1A-binding protein p400 isoform X8
- Conserved Domains (7) summary
-
- smart00573
Location:762 → 833
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1406 → 1707
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1857 → 1982
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:448 → 715
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:796 → 884
- Rrp15p
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1053 → 1269
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_036165578.1 → XP_036021471.1 E1A-binding protein p400 isoform X9
- Conserved Domains (6) summary
-
- smart00573
Location:726 → 797
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1370 → 1671
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1821 → 1946
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1017 → 1233
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
- cl41773
Location:2876 → 3088
- SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
-
XM_017321134.3 → XP_017176623.1 E1A-binding protein p400 isoform X9
- Conserved Domains (6) summary
-
- smart00573
Location:726 → 797
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1370 → 1671
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1821 → 1946
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1017 → 1233
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
- cl41773
Location:2876 → 3088
- SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
-
XM_017321132.3 → XP_017176621.1 E1A-binding protein p400 isoform X7
- Conserved Domains (5) summary
-
- smart00573
Location:763 → 834
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1407 → 1708
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1858 → 1983
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1054 → 1270
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_030254872.2 → XP_030110732.1 E1A-binding protein p400 isoform X12
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1444 → 1663
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1813 → 1938
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_006535276.5 → XP_006535339.1 E1A-binding protein p400 isoform X13
- UniProtKB/Swiss-Prot
-
Q8CHI8
- Related
- ENSMUSP00000108054.3, ENSMUST00000112435.9
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1444 → 1663
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1813 → 1938
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_017321135.3 → XP_017176624.1 E1A-binding protein p400 isoform X10
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1444 → 1663
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1813 → 1938
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_036165577.1 → XP_036021470.1 E1A-binding protein p400 isoform X5
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- PRK10927
Location:499 → 603
- PRK10927; cell division protein FtsN
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
- cl41773
Location:2931 → 3143
- SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
-
XM_017321131.3 → XP_017176620.1 E1A-binding protein p400 isoform X2
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_006535271.5 → XP_006535334.1 E1A-binding protein p400 isoform X6
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_006535269.5 → XP_006535332.1 E1A-binding protein p400 isoform X3
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_006535265.5 → XP_006535328.1 E1A-binding protein p400 isoform X1
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_017321130.3 → XP_017176619.1 E1A-binding protein p400 isoform X1
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_030254869.1 → XP_030110729.1 E1A-binding protein p400 isoform X8
- Conserved Domains (7) summary
-
- smart00573
Location:762 → 833
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1406 → 1707
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1857 → 1982
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:448 → 715
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:796 → 884
- Rrp15p
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1053 → 1269
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_030254871.1 → XP_030110731.1 E1A-binding protein p400 isoform X9
- Conserved Domains (6) summary
-
- smart00573
Location:726 → 797
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1370 → 1671
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1821 → 1946
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1017 → 1233
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
- cl41773
Location:2876 → 3088
- SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
-
XM_017321129.2 → XP_017176618.1 E1A-binding protein p400 isoform X1
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_006535277.5 → XP_006535340.1 E1A-binding protein p400 isoform X14
- Conserved Domains (7) summary
-
- smart00573
Location:762 → 833
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1406 → 1707
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1857 → 1982
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:448 → 715
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:796 → 884
- Rrp15p
- pfam15790
Location:1 → 451
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1053 → 1269
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
-
XM_036165579.1 → XP_036021472.1 E1A-binding protein p400 isoform X11
- UniProtKB/Swiss-Prot
-
Q9DA54
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:572 → 762
- PHA03247; large tegument protein UL36; Provisional
- PRK10927
Location:499 → 603
- PRK10927; cell division protein FtsN
- cd18793
Location:1813 → 1938
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
- cl41773
Location:2852 → 3064
- SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
-
XM_006535270.5 → XP_006535333.1 E1A-binding protein p400 isoform X4
- Conserved Domains (7) summary
-
- smart00573
Location:799 → 870
- HSA; domain in helicases and associated with SANT domains
- PHA03247
Location:1443 → 1744
- PHA03247; large tegument protein UL36; Provisional
- cd18793
Location:1894 → 2019
- SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
- pfam03154
Location:455 → 752
- Atrophin-1; Atrophin-1 family
- pfam07890
Location:833 → 921
- Rrp15p
- pfam15790
Location:1 → 506
- EP400_N; E1A-binding protein p400, N-terminal
- cl28899
Location:1090 → 1306
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily