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C22H22orf42 chromosome 22 C22orf42 homolog [ Pan troglodytes (chimpanzee) ]

Gene ID: 738338, updated on 17-Aug-2024

Summary

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Official Symbol
C22H22orf42provided by VGNC
Official Full Name
chromosome 22 C22orf42 homologprovided by VGNC
Primary source
VGNC:VGNC:12821
Locus tag
CK820_G0024589
See related
Ensembl:ENSPTRG00000029444
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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Location:
chromosome: 23
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (34255433..34280015, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (27287830..27311307, complement)

Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 5 member 1 Neighboring gene small ribosomal subunit protein eS17-like Neighboring gene uncharacterized LOC129138464 Neighboring gene uncharacterized LOC107970230 Neighboring gene ret finger protein like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein C22orf42 homolog
Names
C22orf42
DJ90G24.6 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280016.1 → NP_001266945.1  uncharacterized protein C22orf42 homolog

    See identical proteins and their annotated locations for NP_001266945.1

    Status: PROVISIONAL

    Source sequence(s)
    AK305448
    UniProtKB/TrEMBL
    A0A2I3TKX1, A0A2J8QP69, G2HFD4

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    34255433..34280015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063807564.1 → XP_063663634.1  uncharacterized protein C22orf42 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2I3TKX1

  2. XM_054675404.2 → XP_054531379.1  uncharacterized protein C22orf42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2I3TKX1, A0A2J8QP69, G2HFD4

  3. XM_054675405.2 → XP_054531380.1  uncharacterized protein C22orf42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2I3TKX1, A0A2J8QP69, G2HFD4

  4. XM_063807568.1 → XP_063663638.1  uncharacterized protein C22orf42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2I3TKX1, A0A2J8QP69, G2HFD4

  5. XM_063807565.1 → XP_063663635.1  uncharacterized protein C22orf42 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2I3TKX1

  6. XM_063807567.1 → XP_063663637.1  uncharacterized protein C22orf42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2I3TKX1, A0A2J8QP69, G2HFD4

  7. XM_063807566.1 → XP_063663636.1  uncharacterized protein C22orf42 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2I3TKX1

  8. XM_054675402.2 → XP_054531377.1  uncharacterized protein C22orf42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2I3TKX1, A0A2J8QP69, G2HFD4
Nucleotide Protein
Heading Accession and Version

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