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CLMP CXADR like membrane protein [ Pan troglodytes (chimpanzee) ]

Gene ID: 736600, updated on 17-Aug-2024

Summary

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Official Symbol
CLMPprovided by VGNC
Official Full Name
CXADR like membrane proteinprovided by VGNC
Primary source
VGNC:VGNC:11756
Locus tag
CK820_G0015601
See related
Ensembl:ENSPTRG00000004405
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (125004607..125125609, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (124220516..124341340, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD14 Neighboring gene uncharacterized LOC104001360 Neighboring gene heat shock protein family A (Hsp70) member 8 Neighboring gene FUN14 domain-containing protein 1-like Neighboring gene uncharacterized LOC134807392 Neighboring gene uncharacterized LOC107967242 Neighboring gene uncharacterized LOC134807393 Neighboring gene U8 small nucleolar RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CXADR-like membrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    125004607..125125609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001136596.7 → XP_001136596.2  CXADR-like membrane protein

    See identical proteins and their annotated locations for XP_001136596.2

    UniProtKB/TrEMBL
    A0A2I3S508, A0A2J8N1X3, A0A6D2WRA6, H2Q501
    Related
    ENSPTRP00000007541.1
    Conserved Domains (2) summary
    smart00409
    Location:144 → 225
    IG; Immunoglobulin
    cd20960
    Location:13 → 127
    IgV_CAR_like; Immunoglobulin Variable (V) domain of the Coxsackievirus and Adenovirus Receptor (CAR), and similar proteins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials