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orai2.S ORAI calcium release-activated calcium modulator 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734537, updated on 18-Sep-2024

Summary

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Official Symbol
orai2.S
Official Full Name
ORAI calcium release-activated calcium modulator 2 S homeolog
Primary source
Xenbase:XB-GENE-5781724
Locus tag
XELAEV_18010644mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
orai1; orai2; orai-1; tmem142a; tmem142b
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See orai2.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (150587576..150597133, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (134808022..134817581, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 120B S homeolog Neighboring gene MORN repeat containing 3 S homeolog Neighboring gene lysine (K)-specific demethylase 2B S homeolog Neighboring gene ring finger protein 34, E3 ubiquitin protein ligase S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC115378

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
  
enables store-operated calcium channel activity IEA
Inferred from Electronic Annotation
more info
  
enables store-operated calcium channel activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within adaptive immune response IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within positive regulation of calcium ion transport ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within store-operated calcium entry IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within store-operated calcium entry ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
calcium release-activated calcium channel protein 1
Names
protein orai-1
transmembrane protein 142A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096017.1 → NP_001089486.1  calcium release-activated calcium channel protein 1

    See identical proteins and their annotated locations for NP_001089486.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097707
    UniProtKB/Swiss-Prot
    Q5EAU0
    UniProtKB/TrEMBL
    A0A974DX25
    Conserved Domains (1) summary
    pfam07856
    Location:45 → 225
    Orai-1; Mediator of CRAC channel activity

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    150587576..150597133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5EAU0.1 GenPept UniProtKB/Swiss-Prot:Q5EAU0

Gene LinkOut

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