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Tepp testis, prostate and placenta expressed [ Mus musculus (house mouse) ]

Gene ID: 73407, updated on 26-Sep-2022

Summary

Official Symbol
Teppprovided by MGI
Official Full Name
testis, prostate and placenta expressedprovided by MGI
Primary source
MGI:MGI:1920657
See related
Ensembl:ENSMUSG00000090206 AllianceGenome:MGI:1920657
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700055M20Rik
Summary
Orthologous to human TEPP (testis, prostate and placenta expressed). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 72.3) and whole brain E14.5 (RPKM 2.2) See more
Orthologs
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Genomic context

See Tepp in Genome Data Viewer
Location:
8 C5; 8
Exon count:
10
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (96038148..96053239)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (95311569..95326211)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene cyclic nucleotide gated channel beta 1 Neighboring gene microtubule-associated protein 1 light chain 3 pseudogene copy 6 Neighboring gene zinc finger protein 319 Neighboring gene U6 snRNA biogenesis 1 Neighboring gene matrix metallopeptidase 15

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Clone Names

  • MGC107117

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
testis, prostate and placenta-expressed protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028532.3NP_082808.1  testis, prostate and placenta-expressed protein isoform 2

    See identical proteins and their annotated locations for NP_082808.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon in the 5' coding region and uses a downstream start codon compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
    Source sequence(s)
    AC102518, AK006802, BY706785
    Consensus CDS
    CCDS22558.1
    UniProtKB/Swiss-Prot
    Q6IMH0
    Related
    ENSMUSP00000096080.3, ENSMUST00000098480.9
  2. NM_199455.2NP_955534.1  testis, prostate and placenta-expressed protein isoform 1

    See identical proteins and their annotated locations for NP_955534.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC102518, BC087870, BY706785
    Consensus CDS
    CCDS22557.1
    UniProtKB/Swiss-Prot
    Q6IMH0, Q9D9K7
    Related
    ENSMUSP00000125362.2, ENSMUST00000161029.9

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    96038148..96053239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036154321.1XP_036010214.1  testis, prostate and placenta-expressed protein isoform X3

    UniProtKB/Swiss-Prot
    Q9D9K7
  2. XM_036154322.1XP_036010215.1  testis, prostate and placenta-expressed protein isoform X3

    UniProtKB/Swiss-Prot
    Q9D9K7
  3. XM_036154323.1XP_036010216.1  testis, prostate and placenta-expressed protein isoform X4

  4. XM_036154317.1XP_036010210.1  testis, prostate and placenta-expressed protein isoform X1

  5. XM_036154316.1XP_036010209.1  testis, prostate and placenta-expressed protein isoform X1

  6. XM_036154319.1XP_036010212.1  testis, prostate and placenta-expressed protein isoform X1

  7. XM_036154318.1XP_036010211.1  testis, prostate and placenta-expressed protein isoform X1

  8. XM_036154320.1XP_036010213.1  testis, prostate and placenta-expressed protein isoform X2

  9. XM_006531402.3XP_006531465.1  testis, prostate and placenta-expressed protein isoform X2

    See identical proteins and their annotated locations for XP_006531465.1