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TEPP testis, prostate and placenta expressed [ Homo sapiens (human) ]

Gene ID: 374739, updated on 23-Nov-2021

Summary

Official Symbol
TEPPprovided by HGNC
Official Full Name
testis, prostate and placenta expressedprovided by HGNC
Primary source
HGNC:HGNC:33745
See related
Ensembl:ENSG00000159648 MIM:610264
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.8), thyroid (RPKM 0.7) and 11 other tissues See more
Orthologs
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Genomic context

See TEPP in Genome Data Viewer
Location:
16q21
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (57976544..57988116)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (58010448..58022020)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene kinesin family member C3 Neighboring gene RNA, U6 small nuclear 20, pseudogene Neighboring gene cyclic nucleotide gated channel subunit beta 1 Neighboring gene Sharpr-MPRA regulatory region 3942 Neighboring gene zinc finger protein 319 Neighboring gene U6 snRNA biogenesis phosphodiesterase 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC129930, MGC129931

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
testis, prostate and placenta-expressed protein
Names
testicular tissue protein Li 196
testis/prostate/placenta-expressed protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199046.3NP_950247.3  testis, prostate and placenta-expressed protein isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1).
    Source sequence(s)
    AC010543, HM005509
    Consensus CDS
    CCDS10790.1
    Related
    ENSP00000290871.6, ENST00000290871.10
  2. NM_199456.3NP_955535.3  testis, prostate and placenta-expressed protein isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1.
    Source sequence(s)
    AC010543, BC104459, HM005509
    Consensus CDS
    CCDS45496.1
    Related
    ENSP00000401917.3, ENST00000441824.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    57976544..57988116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017023218.1XP_016878707.1  testis, prostate and placenta-expressed protein isoform X1

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