Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Rps6kb1provided by MGI
Official Full Name: ribosomal protein S6 kinase, polypeptide 1provided by MGI
Primary source: MGI:MGI:1270849
See related: Ensembl:ENSMUSG00000020516 AllianceGenome:MGI:1270849
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: S6K; S6K1; p70s6k; P70S6K1; AA959758; AI256796; AI314060; p70 S6KA; p70-S6K 1; p70/85s6k; S6K-beta-1; 2610318I15Rik; p70 S6K-alpha
Summary: Enables protein kinase activity. Involved in several processes, including cellular response to interferon-gamma; long-chain fatty acid import into cell; and peptidyl-serine phosphorylation. Acts upstream of or within several processes, including behavioral fear response; cellular response to hormone stimulus; and protein kinase B signaling. Located in mitochondrion. Is expressed in several structures, including central nervous system; early conceptus; olfactory epithelium; reproductive system; and retina nuclear layer. Orthologous to human RPS6KB1 (ribosomal protein S6 kinase B1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in CNS E11.5 (RPKM 5.0), limb E14.5 (RPKM 4.8) and 26 other tissues See more
Orthologs: human all
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Genomic context

Location:: 11; 11 C

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
109	current	GRCm39 (GCF_000001635.27)	11	NC_000077.7 (86389695..86435711, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	11	NC_000077.6 (86498869..86544885, complement)
Build 37.2	previous assembly	MGSCv37 (GCF_000001635.18)	11	NC_000077.5 (86312511..86358309, complement)

Chromosome 11 - NC_000077.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

S6K1 controls adiponectin expression by inducing a transcriptional switch: BMAL1-to-EZH2.
Title: S6K1 controls adiponectin expression by inducing a transcriptional switch: BMAL1-to-EZH2.
p70 Ribosomal Protein S6 Kinase Is a Checkpoint of Human Hepatic Stellate Cell Activation and Liver Fibrosis in Mice.
Title: p70 Ribosomal Protein S6 Kinase Is a Checkpoint of Human Hepatic Stellate Cell Activation and Liver Fibrosis in Mice.
A role for translational regulation by S6 kinase and a downstream target in inflammatory pain.
Title: A role for translational regulation by S6 kinase and a downstream target in inflammatory pain.
Genetic removal of p70 S6K1 corrects coding sequence length-dependent alterations in mRNA translation in fragile X syndrome mice.
Title: Genetic removal of p70 S6K1 corrects coding sequence length-dependent alterations in mRNA translation in fragile X syndrome mice.
S6K1 Is Indispensible for Stress-Induced Microtubule Acetylation and Autophagic Flux.
Title: S6K1 Is Indispensible for Stress-Induced Microtubule Acetylation and Autophagic Flux.
High mobility group box 2 regulates skeletal muscle development through ribosomal protein S6 kinase 1.
Title: High mobility group box 2 regulates skeletal muscle development through ribosomal protein S6 kinase 1.
Deficiency of the oxidative stress-responsive kinase p70S6K1 restores autophagy and ameliorates neural tube defects in diabetic embryopathy.
Title: Deficiency of the oxidative stress-responsive kinase p70S6K1 restores autophagy and ameliorates neural tube defects in diabetic embryopathy.
Genetic deletion of S6k1 does not rescue the phenotypic deficits observed in the R6/2 mouse model of Huntington's disease.
Title: Genetic deletion of S6k1 does not rescue the phenotypic deficits observed in the R6/2 mouse model of Huntington's disease.
OGT suppresses S6K1-mediated macrophage inflammation and metabolic disturbance.
Title: OGT suppresses S6K1-mediated macrophage inflammation and metabolic disturbance.
Our data demonstrated that S6K1 was the downstream effector of mTOR and that S6K1 was critical for both rod and cone survival in Retinitis pigmentosa (RP). Our findings make a strong case for targeting S6K1 as a promising therapeutic strategy for promoting the survival of photoreceptors in RP
Title: Ribosomal protein S6 kinase 1 promotes the survival of photoreceptors in retinitis pigmentosa.

Submit: New GeneRIF Correction See all GeneRIFs (135)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Gene trapped (1)
Targeted (4) 1 citation
Endonuclease-mediated (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

AV007605 (e-PCR)
- UniSTS:164473

AA959758 (e-PCR)
- UniSTS:160138

NoName (e-PCR)
- UniSTS:236687

AI314060 (e-PCR)
- UniSTS:165783

Rps6kb1 (e-PCR), detects polymorphism
- UniSTS:528298

RH136097 (e-PCR)
- UniSTS:210092

Homology

Homologs of the Rps6kb1 gene: The Rps6kb1 gene is conserved in human, chimpanzee, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, A.thaliana, rice, and frog.
Orthologs from Annotation Pipeline: 427 organisms have orthologs with human gene Rps6kb1
Orthologs

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables ATP binding	ISO Inferred from Sequence Orthology more info
enables PDZ domain binding	ISO Inferred from Sequence Orthology more info
enables identical protein binding	ISO Inferred from Sequence Orthology more info
enables kinase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info
enables peptide binding	ISO Inferred from Sequence Orthology more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein kinase activity	IDA Inferred from Direct Assay more info	PubMed
enables protein kinase activity	IMP Inferred from Mutant Phenotype more info	PubMed
enables protein kinase activity	ISO Inferred from Sequence Orthology more info
enables protein phosphatase 2A binding	ISO Inferred from Sequence Orthology more info
enables protein serine/threonine kinase activity	IBA Inferred from Biological aspect of Ancestor more info	PubMed
enables protein serine/threonine/tyrosine kinase activity	ISO Inferred from Sequence Orthology more info	PubMed
enables ribosomal protein S6 kinase activity	IBA Inferred from Biological aspect of Ancestor more info	PubMed
enables ribosomal protein S6 kinase activity	ISO Inferred from Sequence Orthology more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in G1/S transition of mitotic cell cycle	ISO Inferred from Sequence Orthology more info
involved_in TOR signaling	IBA Inferred from Biological aspect of Ancestor more info	PubMed
involved_in TOR signaling	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within TORC1 signaling	ISO Inferred from Sequence Orthology more info	PubMed
acts_upstream_of_or_within apoptotic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within behavioral fear response	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within cell cycle	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cellular response to dexamethasone stimulus	IDA Inferred from Direct Assay more info	PubMed
involved_in cellular response to growth factor stimulus	ISO Inferred from Sequence Orthology more info
involved_in cellular response to insulin stimulus	IBA Inferred from Biological aspect of Ancestor more info	PubMed
acts_upstream_of_or_within cellular response to insulin stimulus	IDA Inferred from Direct Assay more info	PubMed
involved_in cellular response to interferon-gamma	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within cellular response to organic cyclic compound	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within germ cell development	IDA Inferred from Direct Assay more info	PubMed
involved_in long-chain fatty acid import into cell	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in negative regulation of apoptotic process	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in negative regulation of apoptotic process	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within negative regulation of extrinsic apoptotic signaling pathway	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in negative regulation of insulin receptor signaling pathway	ISO Inferred from Sequence Orthology more info
involved_in peptidyl-serine phosphorylation	IBA Inferred from Biological aspect of Ancestor more info	PubMed
involved_in peptidyl-serine phosphorylation	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in peptidyl-serine phosphorylation	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within phosphorylation	IEA Inferred from Electronic Annotation more info
involved_in positive regulation of mitotic cell cycle	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of skeletal muscle tissue growth	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of smooth muscle cell migration	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of smooth muscle cell proliferation	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of translation	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of translational initiation	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within protein kinase B signaling	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within protein phosphorylation	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within protein phosphorylation	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in protein phosphorylation	ISO Inferred from Sequence Orthology more info
involved_in regulation of glucose import	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within regulation of translation	IEA Inferred from Electronic Annotation more info
involved_in response to insulin	ISO Inferred from Sequence Orthology more info
involved_in response to nutrient levels	ISO Inferred from Sequence Orthology more info
involved_in response to tumor necrosis factor	ISO Inferred from Sequence Orthology more info
involved_in signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cell junction	IEA Inferred from Electronic Annotation more info
located_in cell surface	ISO Inferred from Sequence Orthology more info
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info	PubMed
located_in cytoplasm	ISO Inferred from Sequence Orthology more info
located_in cytosol	ISO Inferred from Sequence Orthology more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IDA Inferred from Direct Assay more info	PubMed
located_in mitochondrion	ISO Inferred from Sequence Orthology more info
located_in neuron projection	IEA Inferred from Electronic Annotation more info
located_in nucleoplasm	ISO Inferred from Sequence Orthology more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info	PubMed
located_in nucleus	ISO Inferred from Sequence Orthology more info
located_in perinuclear region of cytoplasm	ISO Inferred from Sequence Orthology more info
is_active_in synapse	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: ribosomal protein S6 kinase beta-1

Names: 70 kDa ribosomal protein S6 kinase 1; p70 S6 kinase alpha; p70 ribosomal S6 kinase alpha; ribosomal protein S6 kinase I; ribosomal protein S6 kinase, 70kD, polypeptide 1

NP_001107806.1

EC 2.7.11.1

NP_001350091.1

EC 2.7.11.1

NP_082535.1

EC 2.7.11.1

XP_006534378.1

EC 2.7.11.1

XP_011247577.1

EC 2.7.11.1

XP_011247578.1

EC 2.7.11.1

XP_036012907.1

EC 2.7.11.1

XP_036012908.1

EC 2.7.11.1

XP_036012909.1

EC 2.7.11.1

XP_036012910.1

EC 2.7.11.1

XP_036012911.1

EC 2.7.11.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001114334.2 → NP_001107806.1 ribosomal protein S6 kinase beta-1 isoform 1

See identical proteins and their annotated locations for NP_001107806.1

Status: VALIDATED

Source sequence(s)

AK032724, AK135716, AL604063

Consensus CDS

CCDS48875.1

UniProtKB/Swiss-Prot

Q8BSK8, Q8CHX0

UniProtKB/TrEMBL

Q3UXD8

Related

ENSMUSP00000119715.2, ENSMUST00000154617.8

Conserved Domains (1) summary

cd05584
Location:94 → 416

STKc_p70S6K; Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase
NM_001363162.1 → NP_001350091.1 ribosomal protein S6 kinase beta-1 isoform 3

Status: VALIDATED

Source sequence(s)

AL604063

Conserved Domains (1) summary

cd05584
Location:41 → 363

STKc_p70S6K; Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase
NM_028259.4 → NP_082535.1 ribosomal protein S6 kinase beta-1 isoform 2

See identical proteins and their annotated locations for NP_082535.1

Status: VALIDATED

Source sequence(s)

AL604063

Consensus CDS

CCDS25201.1

UniProtKB/TrEMBL

Q8C3J7

Related

ENSMUSP00000053188.3, ENSMUST00000058286.9

Conserved Domains (1) summary

cl21453
Location:94 → 195

PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000077.7 Reference GRCm39 C57BL/6J

Range

86389695..86435711 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_036157018.1 → XP_036012911.1 ribosomal protein S6 kinase beta-1 isoform X5

Conserved Domains (1) summary

cl21453
Location:1 → 157

PKc_like; Protein Kinases, catalytic domain
XM_036157014.1 → XP_036012907.1 ribosomal protein S6 kinase beta-1 isoform X4

Conserved Domains (1) summary

cl21453
Location:1 → 213

PKc_like; Protein Kinases, catalytic domain
XM_036157016.1 → XP_036012909.1 ribosomal protein S6 kinase beta-1 isoform X4

Conserved Domains (1) summary

cl21453
Location:1 → 213

PKc_like; Protein Kinases, catalytic domain
XM_036157017.1 → XP_036012910.1 ribosomal protein S6 kinase beta-1 isoform X4

Conserved Domains (1) summary

cl21453
Location:1 → 213

PKc_like; Protein Kinases, catalytic domain
XM_036157015.1 → XP_036012908.1 ribosomal protein S6 kinase beta-1 isoform X4

Conserved Domains (1) summary

cl21453
Location:1 → 213

PKc_like; Protein Kinases, catalytic domain
XM_011249275.4 → XP_011247577.1 ribosomal protein S6 kinase beta-1 isoform X1

Conserved Domains (1) summary

cd05584
Location:94 → 416

STKc_p70S6K; Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase
XM_006534315.5 → XP_006534378.1 ribosomal protein S6 kinase beta-1 isoform X2

Conserved Domains (1) summary

cd05584
Location:48 → 336

STKc_p70S6K; Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase
XM_011249276.4 → XP_011247578.1 ribosomal protein S6 kinase beta-1 isoform X3

Conserved Domains (1) summary

cd05584
Location:94 → 409

STKc_p70S6K; Catalytic domain of the Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase