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1700030K09Rik RIKEN cDNA 1700030K09 gene [ Mus musculus (house mouse) ]

Gene ID: 72254, updated on 31-Jan-2019

Summary

Official Symbol
1700030K09Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700030K09 geneprovided by MGI
Primary source
MGI:MGI:1919504
See related
Ensembl:ENSMUSG00000052794
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in testis adult (RPKM 21.3), ovary adult (RPKM 6.6) and 28 other tissues See more
Orthologs

Genomic context

See 1700030K09Rik in Genome Data Viewer
Location:
8; 8 B3.3
Exon count:
9
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (72443880..72460541)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (74967779..74984440)

Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15-like 1 Neighboring gene predicted gene, 46043 Neighboring gene calreticulin 3 Neighboring gene calcium homeostasis endoplasmic reticulum protein Neighboring gene microRNA 7068 Neighboring gene solute carrier family 35, member E1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C19orf44 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028170.2NP_082446.2  uncharacterized protein C19orf44 homolog

    See identical proteins and their annotated locations for NP_082446.2

    Status: VALIDATED

    Source sequence(s)
    AK133815, CO043582
    Consensus CDS
    CCDS22414.1
    UniProtKB/Swiss-Prot
    Q922C1
    Related
    ENSMUSP00000063244.6, ENSMUST00000064853.12
    Conserved Domains (1) summary
    pfam15391
    Location:455608
    DUF4614; Domain of unknown function (DUF4614)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

    Range
    72443880..72460541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011242328.2XP_011240630.1  uncharacterized protein C19orf44 homolog isoform X1

    Conserved Domains (1) summary
    pfam15391
    Location:484637
    DUF4614; Domain of unknown function (DUF4614)
  2. XM_006509750.2XP_006509813.1  uncharacterized protein C19orf44 homolog isoform X2

    Conserved Domains (1) summary
    pfam15391
    Location:149302
    DUF4614; Domain of unknown function (DUF4614)

RNA

  1. XR_870463.1 RNA Sequence

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