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C19orf44 chromosome 19 open reading frame 44 [ Homo sapiens (human) ]

Gene ID: 84167, updated on 23-Nov-2021

Summary

Official Symbol
C19orf44provided by HGNC
Official Full Name
chromosome 19 open reading frame 44provided by HGNC
Primary source
HGNC:HGNC:26141
See related
Ensembl:ENSG00000105072
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 10.2), ovary (RPKM 6.4) and 25 other tissues See more
Orthologs
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Genomic context

See C19orf44 in Genome Data Viewer
Location:
19p13.11
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (16496382..16521369)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (16607205..16632163)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15 like 1 Neighboring gene ribosomal protein S2 pseudogene 51 Neighboring gene calreticulin 3 Neighboring gene calcium homeostasis endoplasmic reticulum protein Neighboring gene RNA, 7SL, cytoplasmic 146, pseudogene Neighboring gene solute carrier family 35 member E1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ21742, FLJ22492

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein C19orf44

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001288834.2NP_001275763.1  uncharacterized protein C19orf44 isoform 2

    See identical proteins and their annotated locations for NP_001275763.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 3' UTR and has multiple coding region differences, compared to variant 1. The resulting isoform (2) has a shorter C-terminus, compared to isoform 1.
    Source sequence(s)
    AC008764
    Consensus CDS
    CCDS74306.1
    UniProtKB/TrEMBL
    M0R2B3
    Related
    ENSP00000472436.1, ENST00000594035.5
    Conserved Domains (1) summary
    pfam15391
    Location:474609
    DUF4614; Domain of unknown function (DUF4614)
  2. NM_032207.4NP_115583.1  uncharacterized protein C19orf44 isoform 1

    See identical proteins and their annotated locations for NP_115583.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AC008764, AK025395
    Consensus CDS
    CCDS12345.1
    UniProtKB/Swiss-Prot
    Q9H6X5
    Related
    ENSP00000221671.2, ENST00000221671.8
    Conserved Domains (1) summary
    pfam15391
    Location:474641
    DUF4614; Domain of unknown function (DUF4614)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    16496382..16521369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006722920.4XP_006722983.1  uncharacterized protein C19orf44 isoform X3

    See identical proteins and their annotated locations for XP_006722983.1

    UniProtKB/TrEMBL
    M0R2B3
    Conserved Domains (1) summary
    pfam15391
    Location:474609
    DUF4614; Domain of unknown function (DUF4614)
  2. XM_011528354.3XP_011526656.1  uncharacterized protein C19orf44 isoform X2

    See identical proteins and their annotated locations for XP_011526656.1

    UniProtKB/Swiss-Prot
    Q9H6X5
    Conserved Domains (1) summary
    pfam15391
    Location:474641
    DUF4614; Domain of unknown function (DUF4614)
  3. XM_017027350.2XP_016882839.1  uncharacterized protein C19orf44 isoform X1

RNA

  1. XR_936210.3 RNA Sequence

  2. XR_936211.3 RNA Sequence

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