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Slc25a35 solute carrier family 25, member 35 [ Mus musculus (house mouse) ]

Gene ID: 71998, updated on 15-Mar-2023

Summary

Official Symbol
Slc25a35provided by MGI
Official Full Name
solute carrier family 25, member 35provided by MGI
Primary source
MGI:MGI:1919248
See related
Ensembl:ENSMUSG00000018740 AllianceGenome:MGI:1919248
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810012H11Rik
Summary
Located in mitochondrion. Is expressed in several structures, including alimentary system; brain; genitourinary system; olfactory epithelium; and thymus. Orthologous to human SLC25A35 (solute carrier family 25 member 35). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in mammary gland adult (RPKM 33.7), ovary adult (RPKM 32.6) and 18 other tissues See more
Orthologs
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Genomic context

See Slc25a35 in Genome Data Viewer
Location:
11; 11 B3
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (68858880..68865192)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (68968096..68972516)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor (GEF) 15 Neighboring gene predicted gene, 51902 Neighboring gene predicted gene, 32273 Neighboring gene RAN guanine nucleotide release factor Neighboring gene predicted gene, 32384 Neighboring gene phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) Neighboring gene microRNA 3062

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 

General protein information

Preferred Names
solute carrier family 25 member 35

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001418040.1NP_001404969.1  solute carrier family 25 member 35 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL603662
  2. NM_001418041.1NP_001404970.1  solute carrier family 25 member 35 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL603662
  3. NM_001418042.1NP_001404971.1  solute carrier family 25 member 35 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL603662
  4. NM_001418043.1NP_001404972.1  solute carrier family 25 member 35 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL603662
  5. NM_028048.3NP_082324.1  solute carrier family 25 member 35 isoform 1

    See identical proteins and their annotated locations for NP_082324.1

    Status: VALIDATED

    Source sequence(s)
    AL603662
    Consensus CDS
    CCDS24874.1
    UniProtKB/Swiss-Prot
    Q5SWT3, Q9D913
    UniProtKB/TrEMBL
    A0A6P5QSK3
    Related
    ENSMUSP00000099666.4, ENSMUST00000102606.10
    Conserved Domains (1) summary
    pfam00153
    Location:284
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    68858880..68865192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006534273.4XP_006534336.1  solute carrier family 25 member 35 isoform X1

    UniProtKB/Swiss-Prot
    Q5SWT3, Q9D913
    UniProtKB/TrEMBL
    A0A6P5QSK3
    Conserved Domains (1) summary
    pfam00153
    Location:284
    Mito_carr; Mitochondrial carrier protein
  2. XM_006534275.5XP_006534338.1  solute carrier family 25 member 35 isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:134222
    Mito_carr; Mitochondrial carrier protein
  3. XM_006534274.5XP_006534337.1  solute carrier family 25 member 35 isoform X2

    UniProtKB/TrEMBL
    A0A6P7RXB0
    Related
    ENSMUSP00000018884.6, ENSMUST00000018884.6
    Conserved Domains (1) summary
    pfam00153
    Location:284
    Mito_carr; Mitochondrial carrier protein
  4. XM_006534276.3XP_006534339.1  solute carrier family 25 member 35 isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:134222
    Mito_carr; Mitochondrial carrier protein