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Vps35l VPS35 endosomal protein sorting factor like [ Mus musculus (house mouse) ]

Gene ID: 71517, updated on 14-Feb-2023


Official Symbol
Vps35lprovided by MGI
Official Full Name
VPS35 endosomal protein sorting factor likeprovided by MGI
Primary source
See related
Ensembl:ENSMUSG00000030982 AllianceGenome:MGI:1918767
Gene type
protein coding
RefSeq status
Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Vsp35l; 2610029J22Rik; 9030624J02Rik
Predicted to be involved in Golgi to plasma membrane transport and endocytic recycling. Predicted to act upstream of or within protein transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endosome. Human ortholog(s) of this gene implicated in Ritscher-Schinzel syndrome. Orthologous to human VPS35L (VPS35 endosomal protein sorting factor like). [provided by Alliance of Genome Resources, Apr 2022]
Ubiquitous expression in CNS E18 (RPKM 16.3), placenta adult (RPKM 15.9) and 28 other tissues See more
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Genomic context

See Vps35l in Genome Data Viewer
7; 7 F2
Exon count:
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (118339401..118440714)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (118740178..118841491)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene glycerophosphodiester phosphodiesterase 1 Neighboring gene centriolar coiled coil protein 110 Neighboring gene predicted gene, 26147 Neighboring gene lysine rich nucleolar protein 1 Neighboring gene IQ motif containing K Neighboring gene G protein-coupled receptor, family C, group 5, member B Neighboring gene predicted gene, 39076

Genomic regions, transcripts, and products


  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a



Alleles of this type are documented at Mouse Genome Informatics  (MGI)


Products Interactant Other Gene Complex Source Pubs Description

General gene information



Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport ISO
Inferred from Sequence Orthology
more info
involved_in endocytic recycling IBA
Inferred from Biological aspect of Ancestor
more info
involved_in endocytic recycling ISO
Inferred from Sequence Orthology
more info
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
Component Evidence Code Pubs
is_active_in endosome IBA
Inferred from Biological aspect of Ancestor
more info
located_in endosome ISO
Inferred from Sequence Orthology
more info
located_in membrane IEA
Inferred from Electronic Annotation
more info

General protein information

Preferred Names
VPS35 endosomal protein-sorting factor-like; VPS35 endosomal protein sorting factor-like
UPF0505 protein C16orf62 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027815.5NP_082091.4  VPS35 endosomal protein-sorting factor-like

    Status: VALIDATED

    Source sequence(s)
    AC152412, AC165086
    Consensus CDS
    ENSMUSP00000051263.8, ENSMUST00000059390.13

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J


  1. NC_000073.7 Reference GRCm39 C57BL/6J

    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006508212.2XP_006508275.1  VPS35 endosomal protein sorting factor-like isoform X1


  1. XR_378273.2 RNA Sequence