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Ankrd24 ankyrin repeat domain 24 [ Mus musculus (house mouse) ]

Gene ID: 70615, updated on 30-Apr-2024

Summary

Official Symbol
Ankrd24provided by MGI
Official Full Name
ankyrin repeat domain 24provided by MGI
Primary source
MGI:MGI:1890394
See related
Ensembl:ENSMUSG00000054708 AllianceGenome:MGI:1890394
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D10Bur2e; 4631433D01Rik; 5730519E19Rik
Summary
Is expressed in cochlea; olfactory epithelium; pituitary gland; vagus ganglion; and vestibulo-cochlear ganglion. Orthologous to human ANKRD24 (ankyrin repeat domain 24). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 10.1), CNS E18 (RPKM 9.2) and 28 other tissues See more
Orthologs
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Genomic context

Location:
10 C1; 10 39.72 cM
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81464352..81483446)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81627821..81647612)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E464 Neighboring gene zinc finger protein pseudogene Neighboring gene STARR-seq mESC enhancer starr_27345 Neighboring gene STARR-positive B cell enhancer ABC_E6888 Neighboring gene sirtuin 6 Neighboring gene STARR-positive B cell enhancer ABC_E9797 Neighboring gene STARR-positive B cell enhancer ABC_E6889 Neighboring gene STARR-seq mESC enhancer starr_27348 Neighboring gene predicted gene 10778 Neighboring gene predicted gene, 51792 Neighboring gene predicted gene 8112

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in auditory receptor cell stereocilium organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in biological_process ND
No biological Data available
more info
 
involved_in sensory perception of sound IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in stereocilium IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
ankyrin repeat domain-containing protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374016.1NP_001360945.1  ankyrin repeat domain-containing protein 24 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC153919
    Conserved Domains (6) summary
    PTZ00322
    Location:190311
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:56243
    PHA02875; ankyrin repeat protein; Provisional
    COG1196
    Location:319538
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:325985
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:116146
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:120212
    Ank_2; Ankyrin repeats (3 copies)
  2. NM_027480.3NP_081756.4  ankyrin repeat domain-containing protein 24 isoform 2

    See identical proteins and their annotated locations for NP_081756.4

    Status: VALIDATED

    Source sequence(s)
    AC153919, AK043638, BC017633, CB524981, CJ177454, CJ183294, CJ243196
    Consensus CDS
    CCDS36001.1
    UniProtKB/Swiss-Prot
    E9QJV7, Q80VM7
    Related
    ENSMUSP00000112932.2, ENSMUST00000119336.8
    Conserved Domains (6) summary
    PTZ00322
    Location:160281
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:26213
    PHA02875; ankyrin repeat protein; Provisional
    COG1196
    Location:289508
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:295955
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:86116
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:90182
    Ank_2; Ankyrin repeats (3 copies)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    81464352..81483446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006514093.5XP_006514156.1  ankyrin repeat domain-containing protein 24 isoform X3

    See identical proteins and their annotated locations for XP_006514156.1

    Conserved Domains (5) summary
    PTZ00322
    Location:189310
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:55242
    PHA02875; ankyrin repeat protein; Provisional
    TIGR02168
    Location:3241024
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:115145
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:119211
    Ank_2; Ankyrin repeats (3 copies)
  2. XM_030245274.2XP_030101134.1  ankyrin repeat domain-containing protein 24 isoform X14

    UniProtKB/TrEMBL
    Q8VD21
    Conserved Domains (1) summary
    TIGR02168
    Location:384566
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  3. XM_006514096.5XP_006514159.1  ankyrin repeat domain-containing protein 24 isoform X5

    Conserved Domains (5) summary
    PTZ00322
    Location:160281
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:26213
    PHA02875; ankyrin repeat protein; Provisional
    TIGR02168
    Location:295995
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:86116
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:90182
    Ank_2; Ankyrin repeats (3 copies)
  4. XM_006514098.5XP_006514161.1  ankyrin repeat domain-containing protein 24 isoform X7

    See identical proteins and their annotated locations for XP_006514161.1

    UniProtKB/Swiss-Prot
    E9QJV7, Q80VM7
    Conserved Domains (6) summary
    PTZ00322
    Location:160281
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:26213
    PHA02875; ankyrin repeat protein; Provisional
    COG1196
    Location:289508
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:295955
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:86116
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:90182
    Ank_2; Ankyrin repeats (3 copies)
  5. XM_006514102.5XP_006514165.1  ankyrin repeat domain-containing protein 24 isoform X10

    See identical proteins and their annotated locations for XP_006514165.1

    Conserved Domains (4) summary
    PTZ00322
    Location:65186
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:200900
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:2354
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:28120
    Ank_2; Ankyrin repeats (3 copies)
  6. XM_006514094.5XP_006514157.1  ankyrin repeat domain-containing protein 24 isoform X3

    See identical proteins and their annotated locations for XP_006514157.1

    Conserved Domains (5) summary
    PTZ00322
    Location:189310
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:55242
    PHA02875; ankyrin repeat protein; Provisional
    TIGR02168
    Location:3241024
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:115145
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:119211
    Ank_2; Ankyrin repeats (3 copies)
  7. XM_036156008.1XP_036011901.1  ankyrin repeat domain-containing protein 24 isoform X8

    Conserved Domains (4) summary
    TIGR02168
    Location:234934
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:2555
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:445
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:29121
    Ank_2; Ankyrin repeats (3 copies)
  8. XM_036156013.1XP_036011906.1  ankyrin repeat domain-containing protein 24 isoform X12

    Conserved Domains (4) summary
    PTZ00322
    Location:16137
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:151851
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:738
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:171
    Ank_2; Ankyrin repeats (3 copies)
  9. XM_006514103.5XP_006514166.1  ankyrin repeat domain-containing protein 24 isoform X10

    See identical proteins and their annotated locations for XP_006514166.1

    Conserved Domains (4) summary
    PTZ00322
    Location:65186
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:200900
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:2354
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:28120
    Ank_2; Ankyrin repeats (3 copies)
  10. XM_006514091.5XP_006514154.1  ankyrin repeat domain-containing protein 24 isoform X1

    Conserved Domains (5) summary
    PTZ00322
    Location:207328
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:73260
    PHA02875; ankyrin repeat protein; Provisional
    TIGR02168
    Location:3421042
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:133163
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:137229
    Ank_2; Ankyrin repeats (3 copies)
  11. XM_006514097.5XP_006514160.1  ankyrin repeat domain-containing protein 24 isoform X6

    Conserved Domains (6) summary
    PTZ00322
    Location:207328
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:73260
    PHA02875; ankyrin repeat protein; Provisional
    COG1196
    Location:336555
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:3421002
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:133163
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:137229
    Ank_2; Ankyrin repeats (3 copies)
  12. XM_006514092.5XP_006514155.1  ankyrin repeat domain-containing protein 24 isoform X2

    Conserved Domains (5) summary
    PTZ00322
    Location:190311
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:56243
    PHA02875; ankyrin repeat protein; Provisional
    TIGR02168
    Location:3251025
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:116146
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:120212
    Ank_2; Ankyrin repeats (3 copies)
  13. XM_006514095.5XP_006514158.1  ankyrin repeat domain-containing protein 24 isoform X4

    Conserved Domains (5) summary
    PTZ00322
    Location:161282
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02875
    Location:27214
    PHA02875; ankyrin repeat protein; Provisional
    TIGR02168
    Location:296996
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:87117
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:91183
    Ank_2; Ankyrin repeats (3 copies)
  14. XM_006514099.5XP_006514162.1  ankyrin repeat domain-containing protein 24 isoform X8

    See identical proteins and their annotated locations for XP_006514162.1

    Conserved Domains (4) summary
    TIGR02168
    Location:234934
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:2555
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:445
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:29121
    Ank_2; Ankyrin repeats (3 copies)
  15. XM_006514101.5XP_006514164.1  ankyrin repeat domain-containing protein 24 isoform X9

    Conserved Domains (4) summary
    PTZ00322
    Location:66187
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:201901
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:2455
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:29121
    Ank_2; Ankyrin repeats (3 copies)
  16. XM_036156009.1XP_036011902.1  ankyrin repeat domain-containing protein 24 isoform X11

    Conserved Domains (4) summary
    PTZ00322
    Location:56177
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:191891
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:1445
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:19111
    Ank_2; Ankyrin repeats (3 copies)
  17. XM_036156010.1XP_036011903.1  ankyrin repeat domain-containing protein 24 isoform X12

    Conserved Domains (4) summary
    PTZ00322
    Location:16137
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:151851
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:738
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:171
    Ank_2; Ankyrin repeats (3 copies)
  18. XM_036156011.1XP_036011904.1  ankyrin repeat domain-containing protein 24 isoform X12

    Conserved Domains (4) summary
    PTZ00322
    Location:16137
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:151851
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:738
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:171
    Ank_2; Ankyrin repeats (3 copies)
  19. XM_036156012.1XP_036011905.1  ankyrin repeat domain-containing protein 24 isoform X12

    Conserved Domains (4) summary
    PTZ00322
    Location:16137
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:151851
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:738
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:171
    Ank_2; Ankyrin repeats (3 copies)
  20. XM_006514104.5XP_006514167.1  ankyrin repeat domain-containing protein 24 isoform X12

    Conserved Domains (4) summary
    PTZ00322
    Location:16137
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:151851
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:738
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:171
    Ank_2; Ankyrin repeats (3 copies)
  21. XM_030245275.1XP_030101135.1  ankyrin repeat domain-containing protein 24 isoform X14

    UniProtKB/TrEMBL
    Q8VD21
    Conserved Domains (1) summary
    TIGR02168
    Location:384566
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  22. XM_011243569.1XP_011241871.1  ankyrin repeat domain-containing protein 24 isoform X11

    Conserved Domains (4) summary
    PTZ00322
    Location:56177
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    TIGR02168
    Location:191891
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    sd00045
    Location:1445
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:19111
    Ank_2; Ankyrin repeats (3 copies)
  23. XM_017314088.1XP_017169577.1  ankyrin repeat domain-containing protein 24 isoform X13

    UniProtKB/TrEMBL
    Q8VD21
    Conserved Domains (2) summary
    TIGR02168
    Location:485667
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:23174
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  24. XM_030245273.1XP_030101133.1  ankyrin repeat domain-containing protein 24 isoform X13

    UniProtKB/TrEMBL
    Q8VD21
    Conserved Domains (2) summary
    TIGR02168
    Location:485667
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:23174
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type