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Aldh16a1 aldehyde dehydrogenase 16 family, member A1 [ Mus musculus (house mouse) ]

Gene ID: 69748, updated on 2-Oct-2018

Summary

Official Symbol
Aldh16a1provided by MGI
Official Full Name
aldehyde dehydrogenase 16 family, member A1provided by MGI
Primary source
MGI:MGI:1916998
See related
Ensembl:ENSMUSG00000007833 Vega:OTTMUSG00000023570
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI452234; 2410004H02Rik
Expression
Ubiquitous expression in duodenum adult (RPKM 63.9), small intestine adult (RPKM 38.4) and 25 other tissues See more
Orthologs

Genomic context

See Aldh16a1 in Genome Data Viewer
Location:
7; 7 B3
Exon count:
17
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (45141840..45154538, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (52397210..52409908, complement)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108167422 Neighboring gene FMS-like tyrosine kinase 3 ligand Neighboring gene PIH1 domain containing 1 Neighboring gene solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 Neighboring gene microRNA 7055 Neighboring gene parathyroid hormone 2 Neighboring gene golgi-associated olfactory signaling regulator

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Markers

Homology

Clone Names

  • FLJ00209, MGC19339

Gene Ontology Provided by MGI

Function Evidence Code Pubs
oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
oxidation-reduction process IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
aldehyde dehydrogenase family 16 member A1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145954.2NP_666066.1  aldehyde dehydrogenase family 16 member A1

    See identical proteins and their annotated locations for NP_666066.1

    Status: VALIDATED

    Source sequence(s)
    AK161198, AV231409
    Consensus CDS
    CCDS21231.1
    UniProtKB/Swiss-Prot
    Q571I9
    UniProtKB/TrEMBL
    A0A1B0GSU0
    Related
    ENSMUSP00000148069.1, OTTMUSP00000027745, ENSMUST00000209963.1
    Conserved Domains (1) summary
    cl11961
    Location:19491
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

    Range
    45141840..45154538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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