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Aldh16a1 aldehyde dehydrogenase 16 family, member A1 [ Mus musculus (house mouse) ]

Gene ID: 69748, updated on 9-May-2024

Summary

Official Symbol
Aldh16a1provided by MGI
Official Full Name
aldehyde dehydrogenase 16 family, member A1provided by MGI
Primary source
MGI:MGI:1916998
See related
Ensembl:ENSMUSG00000007833 AllianceGenome:MGI:1916998
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2410004H02Rik
Summary
Predicted to enable oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Orthologous to human ALDH16A1 (aldehyde dehydrogenase 16 family member A1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in duodenum adult (RPKM 63.9), small intestine adult (RPKM 38.4) and 25 other tissues See more
Orthologs
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Genomic context

See Aldh16a1 in Genome Data Viewer
Location:
7 B3; 7 29.15 cM
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (44791257..44804008, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45141833..45154536, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13A Neighboring gene small nucleolar RNA, C/D box 32A Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52391576-52391763 Neighboring gene FMS-like tyrosine kinase 3 ligand Neighboring gene STARR-seq mESC enhancer starr_18831 Neighboring gene PIH1 domain containing 1 Neighboring gene solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 Neighboring gene microRNA 7055 Neighboring gene golgi-associated olfactory signaling regulator

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
aldehyde dehydrogenase family 16 member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145954.2NP_666066.1  aldehyde dehydrogenase family 16 member A1

    See identical proteins and their annotated locations for NP_666066.1

    Status: VALIDATED

    Source sequence(s)
    AK161198, AV231409
    Consensus CDS
    CCDS21231.1
    UniProtKB/Swiss-Prot
    Q3U6I2, Q3UMC3, Q571I9, Q8C0L4, Q8VD78
    UniProtKB/TrEMBL
    A0A1B0GSU0
    Related
    ENSMUSP00000148069.2, ENSMUST00000209963.2
    Conserved Domains (1) summary
    cl11961
    Location:19491
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    44791257..44804008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036153424.1XP_036009317.1  aldehyde dehydrogenase family 16 member A1 isoform X1

    UniProtKB/Swiss-Prot
    Q3U6I2, Q3UMC3, Q571I9, Q8C0L4, Q8VD78