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TDRD3 tudor domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696228, updated on 17-Aug-2024

Summary

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Official Symbol
TDRD3provided by VGNC
Official Full Name
tudor domain containing 3provided by VGNC
Primary source
VGNC:VGNC:79258
Locus tag
EGK_09355
See related
Ensembl:ENSMMUG00000007169
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (39064244..39263326)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (40124462..40328149)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994292 Neighboring gene TAR DNA-binding protein 43 pseudogene Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC106994293 Neighboring gene selenoprotein K pseudogene Neighboring gene eukaryotic initiation factor 4A-I-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tudor domain-containing protein 3
Names
tudor domain-containing protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    39064244..39263326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015121154.2 → XP_014976640.1  tudor domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    F7HF34, G7NK75
    Conserved Domains (3) summary
    cd14282
    Location:194 → 232
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:1 → 72
    RMI1_N; RecQ mediated genome instability protein
    cd20413
    Location:556 → 608
    Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

  2. XM_028837485.1 → XP_028693318.1  tudor domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    F7FJN3, F7HF36
    Related
    ENSMMUP00000036227.3, ENSMMUT00000043216.3
    Conserved Domains (3) summary
    cd14282
    Location:246 → 284
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:2 → 124
    RMI1_N; RecQ mediated genome instability protein
    cd20413
    Location:608 → 660
    Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

  3. XM_028837484.1 → XP_028693317.1  tudor domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    F7FJN3
    Conserved Domains (3) summary
    cd14282
    Location:250 → 288
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    cd20413
    Location:612 → 664
    Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:7 → 128
    RMI1_N; RecQ mediated genome instability protein

  4. XM_015121152.2 → XP_014976638.1  tudor domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    F7HF34, G7NK75
    Conserved Domains (3) summary
    cd14282
    Location:194 → 232
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:1 → 72
    RMI1_N; RecQ mediated genome instability protein
    cd20413
    Location:556 → 608
    Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

  5. XM_015121151.2 → XP_014976637.1  tudor domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AN96, H9YYG8
    Related
    ENSMMUP00000079310.1, ENSMMUT00000090992.1
    Conserved Domains (3) summary
    cd04508
    Location:652 → 700
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:287 → 325
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:41 → 162
    RMI1_N; RecQ mediated genome instability protein

  6. XM_015121153.2 → XP_014976639.1  tudor domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    F7HF34, G7NK75
    Conserved Domains (3) summary
    cd14282
    Location:194 → 232
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:1 → 72
    RMI1_N; RecQ mediated genome instability protein
    cd20413
    Location:556 → 608
    Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

RNA

  1. XR_003724278.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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