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E75 nuclear hormone receptor E75 [ Bombyx mori (domestic silkworm) ]

Gene ID: 692595, updated on 9-Feb-2024

Summary

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Gene symbol
E75
Gene description
nuclear hormone receptor E75
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
E75D
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 10 NC_085116.1 (7843404..7968933, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 10 NC_051367.1 (7661786..7787317, complement)

Chromosome 10 - NC_085116.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134199580 Neighboring gene uncharacterized LOC134199506 Neighboring gene uncharacterized LOC110384975 Neighboring gene eukaryotic translation initiation factor 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The orphan nuclear receptors BmE75A and BmE75C of the silkmoth Bombyx mori: hornmonal control and ovarian expression. Swevers L, et al. Insect Biochem Mol Biol, 2002 Dec. PMID 12429116
  2. Identification of two juvenile hormone inducible transcription factors from the silkworm, Bombyx mori. Matsumoto H, et al. J Insect Physiol, 2015 Sep. PMID 25770979
  3. Expression of ecdysteroid-regulated genes is reduced specifically in the wing discs of the wing-deficient mutant (fl) of Bombyx mori. Matsuoka T, et al. Dev Genes Evol, 2000 Mar. PMID 11180812
  4. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  5. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Expression of E75 and Enhancer of split mbeta(E(spl)mbeta) was induced by juvenile hormone I.
    Title: Identification of two juvenile hormone inducible transcription factors from the silkworm, Bombyx mori.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear hormone receptor E75
Names
orphan nuclear receptor E75

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001043577.1 → NP_001037042.1  nuclear hormone receptor E75 isoform C

    See identical proteins and their annotated locations for NP_001037042.1

    Status: PROVISIONAL

    Source sequence(s)
    AF332551
    UniProtKB/TrEMBL
    Q8WSA0, Q8WSA1
    Conserved Domains (2) summary
    cd07166
    Location:94 → 182
    NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers
    cl11397
    Location:249 → 436
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  2. NM_001112609.1 → NP_001106079.1  nuclear hormone receptor E75 isoform A

    See identical proteins and their annotated locations for NP_001106079.1

    Status: PROVISIONAL

    Source sequence(s)
    AB024904
    UniProtKB/TrEMBL
    Q8WSA2, Q9U5G4
    Conserved Domains (2) summary
    cd07166
    Location:38 → 126
    NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers
    cl11397
    Location:193 → 380
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  3. NM_001112610.1 → NP_001106080.1  nuclear hormone receptor E75 isoform B

    See identical proteins and their annotated locations for NP_001106080.1

    Status: PROVISIONAL

    Source sequence(s)
    AB024905
    UniProtKB/TrEMBL
    Q8WSA0, Q9U5G3
    Conserved Domains (2) summary
    cl02596
    Location:48 → 114
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    cl11397
    Location:181 → 368
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085116.1 Reference ASM3026992v2 Primary Assembly

    Range
    7843404..7968933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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