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Klhdc9 kelch domain containing 9 [ Mus musculus (house mouse) ]

Gene ID: 68874, updated on 5-Mar-2024

Summary

Official Symbol
Klhdc9provided by MGI
Official Full Name
kelch domain containing 9provided by MGI
Primary source
MGI:MGI:1916124
See related
Ensembl:ENSMUSG00000045259 AllianceGenome:MGI:1916124
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ESTM31; 1190002J23Rik
Summary
Predicted to enable cyclin binding activity. Orthologous to human KLHDC9 (kelch domain containing 9). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in frontal lobe adult (RPKM 5.0), cortex adult (RPKM 4.8) and 28 other tissues See more
Orthologs
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Genomic context

See Klhdc9 in Genome Data Viewer
Location:
1 H3; 1 79.36 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (171186017..171188366, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (171358449..171360798, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 20045 Neighboring gene death effector domain-containing Neighboring gene STARR-positive B cell enhancer ABC_E2019 Neighboring gene nitrilase 1 Neighboring gene prefoldin 2 Neighboring gene STARR-positive B cell enhancer ABC_E4387 Neighboring gene nectin cell adhesion molecule 4 Neighboring gene STARR-positive B cell enhancer ABC_E4388 Neighboring gene Rho GTPase activating protein 30 Neighboring gene STARR-positive B cell enhancer ABC_E4389

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables cyclin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables cyclin binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
kelch domain-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033039.2NP_001028211.1  kelch domain-containing protein 9

    See identical proteins and their annotated locations for NP_001028211.1

    Status: PROVISIONAL

    Source sequence(s)
    AK140290
    Consensus CDS
    CCDS35776.1
    UniProtKB/Swiss-Prot
    Q3USL1, Q8BVR4
    UniProtKB/TrEMBL
    B2RUK8
    Related
    ENSMUSP00000056212.5, ENSMUST00000061878.5
    Conserved Domains (3) summary
    sd00038
    Location:2876
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:79118
    Kelch_1; Kelch motif
    pfam13854
    Location:256296
    Kelch_5; Kelch motif

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    171186017..171188366 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)