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Dipk2a divergent protein kinase domain 2A [ Mus musculus (house mouse) ]

Gene ID: 68861, updated on 19-Feb-2019

Summary

Official Symbol
Dipk2aprovided by MGI
Official Full Name
divergent protein kinase domain 2Aprovided by MGI
Primary source
MGI:MGI:1916111
See related
Ensembl:ENSMUSG00000045414
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
HASF; GoPro49; 1190002N15Rik
Expression
Ubiquitous expression in lung adult (RPKM 26.4), ovary adult (RPKM 25.0) and 27 other tissues See more
Orthologs

Genomic context

See Dipk2a in Genome Data Viewer
Location:
9; 9 E3.3
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (94517864..94538081, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (94418283..94438500, complement)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 46148 Neighboring gene predicted gene, 31957 Neighboring gene predicted gene, 39404 Neighboring gene solute carrier family 9 (sodium/hydrogen exchanger), member 9 Neighboring gene microRNA 7656

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
cardiac muscle cell proliferation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cardiac muscle cell proliferation ISO
Inferred from Sequence Orthology
more info
 
negative regulation of smooth muscle cell apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of phosphatidylinositol 3-kinase signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of phosphatidylinositol 3-kinase signaling ISO
Inferred from Sequence Orthology
more info
 
vesicle targeting, to, from or within Golgi IC
Inferred by Curator
more info
PubMed 
Component Evidence Code Pubs
COPI vesicle coat IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
COPI vesicle coat ISO
Inferred from Sequence Orthology
more info
 
COPI-coated vesicle IDA
Inferred from Direct Assay
more info
PubMed 
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
Golgi membrane ISO
Inferred from Sequence Orthology
more info
 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
extracellular region IDA
Inferred from Direct Assay
more info
PubMed 
extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
divergent protein kinase domain 2A
Names
Golgi Protein of 49 kDa
Golgi protein GoPro49
UPF0672 protein C3orf58 homolog
deleted in autism protein 1 homolog
hypoxia and AKT-induced stem cell factor

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033145.2NP_001028317.2  divergent protein kinase domain 2A precursor

    See identical proteins and their annotated locations for NP_001028317.2

    Status: VALIDATED

    Source sequence(s)
    AC160129
    Consensus CDS
    CCDS40725.1
    UniProtKB/Swiss-Prot
    Q3USZ8
    Related
    ENSMUSP00000108651.1, ENSMUST00000113028.1
    Conserved Domains (1) summary
    pfam12260
    Location:206405
    PIP49_C; Protein-kinase domain of FAM69

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

    Range
    94517864..94538081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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