Prr15l proline rich 15-like [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Prr15lprovided by RGD
Official Full Name: proline rich 15-likeprovided by RGD
Primary source: RGD:1592397
See related: EnsemblRapid:ENSRNOG00000049162 AllianceGenome:RGD:1592397
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Orthologous to human PRR15L (proline rich 15 like). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Kidney (RPKM 220.1), Lung (RPKM 154.1) and 1 other tissue See more
Orthologs: human mouse all
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Genomic context

Location:: 10q31

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (82412934..82418897)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (81916491..81922454)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (84866781..84873434)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH139680 (e-PCR)
- UniSTS:221764

D10Got119 (e-PCR)
- UniSTS:114279

RH132171 (e-PCR)
- UniSTS:215454

General protein information

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Preferred Names: proline-rich protein 15-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001398943.1 → NP_001385872.1 proline-rich protein 15-like protein

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010

UniProtKB/TrEMBL

A0A8I6A962, A6HIH5

Related

ENSRNOP00000090295.1, ENSRNOT00000106437.2

Conserved Domains (1) summary

pfam15321
Location:6 → 87

ATAD4; ATPase family AAA domain containing 4