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Myct1 myc target 1 [ Mus musculus (house mouse) ]

Gene ID: 68632, updated on 30-Apr-2024

Summary

Official Symbol
Myct1provided by MGI
Official Full Name
myc target 1provided by MGI
Primary source
MGI:MGI:1915882
See related
Ensembl:ENSMUSG00000046916 AllianceGenome:MGI:1915882
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mtmc1; 1110020B04Rik
Summary
Acts upstream of or within hematopoietic stem cell homeostasis. Predicted to be located in intracellular membrane-bounded organelle. Predicted to be active in nucleoplasm. Is expressed in urinary system. Orthologous to human MYCT1 (MYC target 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in lung adult (RPKM 13.0), heart adult (RPKM 3.6) and 13 other tissues See more
Orthologs
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Genomic context

See Myct1 in Genome Data Viewer
Location:
10 A1; 10 1.99 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (5543728..5556789)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (5593728..5606789)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing, nuclear envelope 1 Neighboring gene STARR-seq mESC enhancer starr_25603 Neighboring gene predicted gene, 40594 Neighboring gene STARR-seq mESC enhancer starr_25602 Neighboring gene predicted gene, 51758 Neighboring gene STARR-seq mESC enhancer starr_25600 Neighboring gene STARR-positive B cell enhancer mm9_chr10:4746082-4746383 Neighboring gene STARR-seq mESC enhancer starr_25599 Neighboring gene vasoactive intestinal polypeptide Neighboring gene predicted gene, 40595

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within hematopoietic stem cell homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear body ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
myc target protein 1
Names
myc target in myeloid cells protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026793.2NP_081069.1  myc target protein 1

    See identical proteins and their annotated locations for NP_081069.1

    Status: VALIDATED

    Source sequence(s)
    AK054222, BB624713, BM569633
    Consensus CDS
    CCDS56681.1
    UniProtKB/Swiss-Prot
    Q3UQ11, Q8C6M8, Q8R411, Q9D182
    Related
    ENSMUSP00000050430.9, ENSMUST00000051809.10
    Conserved Domains (1) summary
    pfam15179
    Location:1187
    Myc_target_1; Myc target protein 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    5543728..5556789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)