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MYCT1 MYC target 1 [ Homo sapiens (human) ]

Gene ID: 80177, updated on 1-Jun-2020

Summary

Official Symbol
MYCT1provided by HGNC
Official Full Name
MYC target 1provided by HGNC
Primary source
HGNC:HGNC:23172
See related
Ensembl:ENSG00000120279 MIM:616805
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MTLC
Expression
Broad expression in spleen (RPKM 14.8), fat (RPKM 8.8) and 22 other tissues See more
Orthologs

Genomic context

See MYCT1 in Genome Data Viewer
Location:
6q25.2
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (152697895..152747175)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (153019030..153045717)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing nuclear envelope protein 1 Neighboring gene Nanog homeobox pseudogene 11 Neighboring gene uncharacterized LOC105378061 Neighboring gene heat shock protein family D (Hsp60) member 1 pseudogene 16 Neighboring gene long intergenic non-protein coding RNA 2840 Neighboring gene vasoactive intestinal peptide

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • FLJ21269, MGC156309, MGC156310

Gene Ontology Provided by GOA

Component Evidence Code Pubs
intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
 
nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleoplasm IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
myc target protein 1
Names
myc target in myeloid cells 1
myc target in myeloid cells protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001371624.1NP_001358553.1  myc target protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL390960
  2. NM_001371625.1NP_001358554.1  myc target protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL390960
  3. NM_001371626.1NP_001358555.1  myc target protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL390960
    Related
    ENSP00000434396.1, ENST00000532295.1
  4. NM_025107.2NP_079383.2  myc target protein 1 isoform 1

    See identical proteins and their annotated locations for NP_079383.2

    Status: VALIDATED

    Source sequence(s)
    AA152372, AK021612, BC022556, BC128463, DA863771
    Consensus CDS
    CCDS5239.1
    UniProtKB/Swiss-Prot
    Q8N699
    Related
    ENSP00000356214.5, ENST00000367245.5
    Conserved Domains (1) summary
    pfam15179
    Location:49234
    Myc_target_1; Myc target protein 1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    152697895..152747175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011536152.3XP_011534454.1  myc target protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011534454.1

    UniProtKB/Swiss-Prot
    Q8N699
    Conserved Domains (1) summary
    pfam15179
    Location:49234
    Myc_target_1; Myc target protein 1
  2. XM_017011319.2XP_016866808.1  myc target protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q8N699
    Conserved Domains (1) summary
    pfam15179
    Location:49234
    Myc_target_1; Myc target protein 1
  3. XM_011536151.3XP_011534453.1  myc target protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011534453.1

    UniProtKB/Swiss-Prot
    Q8N699
    Conserved Domains (1) summary
    pfam15179
    Location:49234
    Myc_target_1; Myc target protein 1
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