U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fam133b family with sequence similarity 133, member B [ Mus musculus (house mouse) ]

Gene ID: 68152, updated on 26-Sep-2022

Summary

Official Symbol
Fam133bprovided by MGI
Official Full Name
family with sequence similarity 133, member Bprovided by MGI
Primary source
MGI:MGI:1915402
See related
Ensembl:ENSMUSG00000058503 AllianceGenome:MGI:1915402
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2900022K02Rik; 5830415L20Rik
Summary
Is expressed in cerebral cortex ventricular layer. Orthologous to several human genes including FAM133B (family with sequence similarity 133 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 10.0), CNS E14 (RPKM 7.3) and 27 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Fam133b in Genome Data Viewer
Location:
5 A1; 5
Exon count:
11
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (3593833..3620548)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (3543833..3570548)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36548 Neighboring gene predicted gene, 36470 Neighboring gene cyclin-dependent kinase 6 Neighboring gene predicted gene, 29868 Neighboring gene RIKEN cDNA 1700109H08 gene Neighboring gene RNA binding motif protein 48 Neighboring gene peroxisomal biogenesis factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001042501.1NP_001035966.1  protein FAM133B

    See identical proteins and their annotated locations for NP_001035966.1

    Status: VALIDATED

    Source sequence(s)
    AC090443, AK008115, BY711248, CK791263
    Consensus CDS
    CCDS39000.1
    UniProtKB/Swiss-Prot
    Q78HY5, Q9CVI2
    Related
    ENSMUSP00000111189.4, ENSMUST00000115527.8

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    3593833..3620548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_026583.2: Suppressed sequence

    Description
    NM_026583.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.