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ACTBP8 ACTB pseudogene 8 [ Homo sapiens (human) ]

Gene ID: 68, updated on 17-Sep-2024

Summary

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Official Symbol
ACTBP8provided by HGNC
Official Full Name
ACTB pseudogene 8provided by HGNC
Primary source
HGNC:HGNC:141
See related
AllianceGenome:HGNC:141
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACTBP2
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Genomic context

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See ACTBP8 in Genome Data Viewer
Location:
6q15
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (88275305..88277073, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (89483802..89485570, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (88985024..88986792, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17377 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17378 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17379 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17380 Neighboring gene cannabinoid receptor 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24814 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:88893112-88893675 Neighboring gene MPRA-validated peak5945 silencer Neighboring gene uncharacterized LOC105377884 Neighboring gene ribosomal protein S14 pseudogene 9 Neighboring gene uncharacterized LOC105377885 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:89022035-89022536 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:89060126-89061325 Neighboring gene uncharacterized LOC124901358 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:89091597-89092538

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assignment of ACTBP8 (alias ACTBP2) within or close to human chromosome band 6q13 using a radiation hybrid panel. Mullokandov M, et al. Cytogenet Cell Genet, 1997. PMID 9345905
  2. Tetranucleotide repeat polymorphism at the human beta-actin related pseudogene H-beta-Ac-psi-2 (ACTBP2). Polymeropoulos MH, et al. Nucleic Acids Res, 1992 Mar 25. PMID 1561114, Free PMC Article
  3. Structure of a human beta-actin-related pseudogene which lacks intervening sequences. Moos M, et al. Nucleic Acids Res, 1982 Dec 11. PMID 6296793, Free PMC Article
  4. Structure of two human beta-actin-related processed genes one of which is located next to a simple repetitive sequence. Moos M, et al. EMBO J, 1983. PMID 6571702, Free PMC Article
  5. Genome-wide association of lipid-lowering response to statins in combined study populations. Barber MJ, et al. PLoS One, 2010 Mar 22. PMID 20339536, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Genome-wide association of lipid-lowering response to statins in combined study populations.
EBI GWAS Catalog

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • actin, beta pseudogene 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000840.7 

    Range
    101..1869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    88275305..88277073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    89483802..89485570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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