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Rpl41 ribosomal protein L41 [ Mus musculus (house mouse) ]

Gene ID: 67945, updated on 8-Dec-2022

Summary

Official Symbol
Rpl41provided by MGI
Official Full Name
ribosomal protein L41provided by MGI
Primary source
MGI:MGI:1915195
See related
Ensembl:ENSMUSG00000093674 AllianceGenome:MGI:1915195
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810055P16Rik; 2210411K19Rik
Summary
Predicted to enable mRNA 3'-UTR binding activity and mRNA 5'-UTR binding activity. Predicted to be involved in cytoplasmic translation. Predicted to be located in endoplasmic reticulum and polysomal ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL41 (ribosomal protein L41). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in liver E14 (RPKM 1775.5), liver E14.5 (RPKM 1355.8) and 28 other tissues See more
Orthologs
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Genomic context

See Rpl41 in Genome Data Viewer
Location:
10; 10 D3
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (128383979..128385037, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (128548110..128549168, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene extended synaptotagmin-like protein 1 Neighboring gene microRNA 6916 Neighboring gene zinc finger CCCH type containing 10 Neighboring gene predicted gene 9176 Neighboring gene proliferation-associated 2G4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm NAS
Non-traceable Author Statement
more info
PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
 
part_of cytosolic large ribosomal subunit IPI
Inferred from Physical Interaction
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_018860.4NP_061348.1  60S ribosomal protein L41

    See identical proteins and their annotated locations for NP_061348.1

    Status: VALIDATED

    Source sequence(s)
    AK160588, AV478133, BU937034
    Consensus CDS
    CCDS56753.1
    UniProtKB/Swiss-Prot
    P62947, Q3UCJ7
    UniProtKB/TrEMBL
    A0A6P5QAZ4
    Related
    ENSMUSP00000135533.2, ENSMUST00000176010.8
    Conserved Domains (1) summary
    pfam05162
    Location:124
    Ribosomal_L41; Ribosomal protein L41

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    128383979..128385037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)