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Rmdn3 regulator of microtubule dynamics 3 [ Mus musculus (house mouse) ]

Gene ID: 67809, updated on 5-Aug-2018

Summary

Official Symbol
Rmdn3provided by MGI
Official Full Name
regulator of microtubule dynamics 3provided by MGI
Primary source
MGI:MGI:1915059
See related
Ensembl:ENSMUSG00000070730 Vega:OTTMUSG00000015760
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rmd3; RMD-3; Fam82a2; Ptpip51; AI131757; 1200015F23Rik
Expression
Ubiquitous expression in cerebellum adult (RPKM 12.0), placenta adult (RPKM 9.8) and 28 other tissues See more
Orthologs

Genomic context

See Rmdn3 in Genome Data Viewer
Location:
2; 2 E5
Exon count:
13
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (119136998..119157034, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (118962734..118982770, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene kinetochore scaffold 1 Neighboring gene RAD51 recombinase Neighboring gene GTP cyclohydrolase I feedback regulator Neighboring gene DnaJ heat shock protein family (Hsp40) member C17 Neighboring gene predicted gene 14137

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Related articles in PubMed

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
apoptotic process IEA
Inferred from Electronic Annotation
more info
 
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
cellular calcium ion homeostasis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
microtubule IEA
Inferred from Electronic Annotation
more info
 
mitochondrial outer membrane ISO
Inferred from Sequence Orthology
more info
 
mitochondrion HDA PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
regulator of microtubule dynamics protein 3
Names
family with sequence similarity 82, member A2
microtubule-associated protein
protein tyrosine phosphatase-interacting protein 51
tyrosine phosphatase interacting protein 51

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033136.3NP_001028308.1  regulator of microtubule dynamics protein 3

    See identical proteins and their annotated locations for NP_001028308.1

    Status: VALIDATED

    Source sequence(s)
    AK151090, AL772264, BY453591
    Consensus CDS
    CCDS16591.1
    UniProtKB/Swiss-Prot
    Q3UJU9
    Related
    ENSMUSP00000092283.5, OTTMUSP00000016776, ENSMUST00000094695.11, OTTMUST00000037435
    Conserved Domains (1) summary
    sd00006
    Location:363413
    TPR; TPR repeat [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

    Range
    119136998..119157034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_374514.1 RNA Sequence

  2. XR_001783171.1 RNA Sequence

  3. XR_001783170.1 RNA Sequence

  4. XR_866337.2 RNA Sequence

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