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Fam174a family with sequence similarity 174, member A [ Mus musculus (house mouse) ]

Gene ID: 67698, updated on 5-Mar-2024

Summary

Official Symbol
Fam174aprovided by MGI
Official Full Name
family with sequence similarity 174, member Aprovided by MGI
Primary source
MGI:MGI:1914948
See related
Ensembl:ENSMUSG00000051185 AllianceGenome:MGI:1914948
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Naa6; Fam174; Tmem157; 2310044D20Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FAM174A (family with sequence similarity 174 member A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 47.8), ovary adult (RPKM 19.3) and 25 other tissues See more
Orthologs
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Genomic context

See Fam174a in Genome Data Viewer
Location:
1 D; 1 47.76 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (95241353..95263009)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (95313628..95335284)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23181 Neighboring gene STARR-seq mESC enhancer starr_01754 Neighboring gene STARR-seq mESC enhancer starr_01755 Neighboring gene predicted gene 5264 Neighboring gene STARR-positive B cell enhancer mm9_chr1:97209938-97210239 Neighboring gene STARR-positive B cell enhancer ABC_E5784 Neighboring gene STARR-positive B cell enhancer ABC_E3292 Neighboring gene STARR-seq mESC enhancer starr_01756 Neighboring gene STARR-seq mESC enhancer starr_01757 Neighboring gene predicted pseudogene 15427 Neighboring gene U7 small nuclear RNA, pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
membrane protein FAM174A
Names
transmembrane protein 157

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026321.4NP_080597.2  membrane protein FAM174A precursor

    See identical proteins and their annotated locations for NP_080597.2

    Status: VALIDATED

    Source sequence(s)
    AK033948, AK084861, BB693858
    Consensus CDS
    CCDS35674.1
    UniProtKB/Swiss-Prot
    Q3UF92, Q8CC46, Q8VDR1, Q9D238, Q9D3L0, Q9D6W5, Q9D6Z3
    UniProtKB/TrEMBL
    C9K0Z9
    Related
    ENSMUSP00000057670.7, ENSMUST00000059975.8
    Conserved Domains (1) summary
    pfam06679
    Location:10190
    DUF1180; Protein of unknown function (DUF1180)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    95241353..95263009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)