U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fibin fin bud initiation factor homolog (zebrafish) [ Mus musculus (house mouse) ]

Gene ID: 67606, updated on 5-Mar-2024

Summary

Official Symbol
Fibinprovided by MGI
Official Full Name
fin bud initiation factor homolog (zebrafish)provided by MGI
Primary source
MGI:MGI:1914856
See related
Ensembl:ENSMUSG00000074971 AllianceGenome:MGI:1914856
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110018M03Rik
Summary
Enables protein homodimerization activity. Acts upstream of or within protein kinase C signaling; response to dexamethasone; and response to manganese ion. Located in endoplasmic reticulum. Is expressed in several structures, including alimentary system; hemolymphoid system gland; musculoskeletal system; respiratory system; and skin. Orthologous to human FIBIN (fin bud initiation factor homolog). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
2 E3; 2 56.7 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (110191270..110193338, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (110360925..110362993, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_05368 Neighboring gene predicted gene, 22997 Neighboring gene gamma-butyrobetaine hydroxylase 1 Neighboring gene predicted gene, 30319 Neighboring gene STARR-seq mESC enhancer starr_05369 Neighboring gene ribosomal protein S3A pseudogene Neighboring gene STARR-seq mESC enhancer starr_05370 Neighboring gene STARR-seq mESC enhancer starr_05371 Neighboring gene STARR-seq mESC enhancer starr_05372 Neighboring gene solute carrier family 5 (sodium/glucose cotransporter), member 12 Neighboring gene predicted gene, 52522

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in protein kinase C signaling IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to dexamethasone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to manganese ion IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
fin bud initiation factor homolog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026271.1NP_080547.1  fin bud initiation factor homolog precursor

    See identical proteins and their annotated locations for NP_080547.1

    Status: PROVISIONAL

    Source sequence(s)
    AK003790
    Consensus CDS
    CCDS16511.1
    UniProtKB/Swiss-Prot
    Q9CQS3
    Related
    ENSMUSP00000097221.4, ENSMUST00000099626.5
    Conserved Domains (1) summary
    pfam15819
    Location:15209
    Fibin; Fin bud initiation factor homologue

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    110191270..110193338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)