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ccdc198 coiled-coil domain containing 198 [ Mus musculus (house mouse) ]

Gene ID: 67082, updated on 31-Jan-2019

Summary

Official Symbol
ccdc198provided by MGI
Official Full Name
coiled-coil domain containing 198provided by MGI
Primary source
MGI:MGI:1914332
See related
Ensembl:ENSMUSG00000021850
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700011H14Rik
Expression
Biased expression in kidney adult (RPKM 9.1), testis adult (RPKM 7.4) and 3 other tissues See more
Orthologs

Genomic context

See ccdc198 in Genome Data Viewer
Location:
14; 14 C1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (49226358..49246326, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (49846034..49865103, complement)

Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein L19, pseudogene 3 Neighboring gene N(alpha)-acetyltransferase 30, NatC catalytic subunit Neighboring gene solute carrier family 35, member F4 Neighboring gene predicted gene, 36082

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein CCDC198; uncharacterized protein C14orf105 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025956.4NP_080232.3  uncharacterized protein CCDC198

    See identical proteins and their annotated locations for NP_080232.3

    Status: VALIDATED

    Source sequence(s)
    AK005866, AK007176
    Consensus CDS
    CCDS26996.1
    UniProtKB/Swiss-Prot
    Q9CPZ1
    Related
    ENSMUSP00000154726.1, ENSMUST00000228936.1
    Conserved Domains (1) summary
    pfam15398
    Location:1292
    DUF4619; Domain of unknown function (DUF4619)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

    Range
    49226358..49246326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011245156.2XP_011243458.1  uncharacterized protein C14orf105 homolog isoform X1

    See identical proteins and their annotated locations for XP_011243458.1

    UniProtKB/Swiss-Prot
    Q9CPZ1
    Conserved Domains (1) summary
    pfam15398
    Location:1292
    DUF4619; Domain of unknown function (DUF4619)
  2. XM_006519439.3XP_006519502.1  uncharacterized protein C14orf105 homolog isoform X2

    Related
    ENSMUSP00000022398.8, ENSMUST00000022398.14
    Conserved Domains (1) summary
    pfam15398
    Location:1291
    DUF4619; Domain of unknown function (DUF4619)
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