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LOC663916 regulator of telomere elongation helicase 1 homolog [ Tribolium castaneum (red flour beetle) ]

Gene ID: 663916, updated on 12-Apr-2024

Summary

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Gene symbol
LOC663916
Gene description
regulator of telomere elongation helicase 1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 9 NC_087402.1 (1234506..1237257, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG4 NC_007419.2 (1138982..1141773, complement)

Chromosome 9 - NC_087402.1Genomic Context describing neighboring genes Neighboring gene transcription factor ATOH7 Neighboring gene anterior open Neighboring gene mitochondrial single stranded DNA-binding protein Neighboring gene regulator of telomere elongation helicase 1 homolog Neighboring gene hypothetical protein Neighboring gene wollknaeuel

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA polymerase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA duplex unwinding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of t-circle formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomeric loop disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of telomere elongation helicase 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087402.1 Reference icTriCast1.1 Primary Assembly

    Range
    1234506..1237257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_969945.4 → XP_975038.1  regulator of telomere elongation helicase 1 homolog

    Conserved Domains (3) summary
    TIGR00604
    Location:10 → 700
    rad3; DNA repair helicase (rad3)
    pfam13307
    Location:504 → 687
    Helicase_C_2; Helicase C-terminal domain
    cl21455
    Location:9 → 266
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
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