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LOC6630676 probable glutamine--tRNA ligase [ Drosophila virilis ]

Gene ID: 6630676, updated on 10-May-2024

Summary

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Gene symbol
LOC6630676
Gene description
probable glutamine--tRNA ligase
Locus tag
Dvir_GJ24549
See related
EnsemblRapid:LOC6630676
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ24549; GJ24549-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6630676 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587574.1 (6420101..6422532, complement)

NW_022587574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6630680 Neighboring gene eukaryotic translation initiation factor 1A Neighboring gene anionic trypsin Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 Neighboring gene sodium/potassium-transporting ATPase subunit beta-1 Neighboring gene sodium/potassium-transporting ATPase subunit beta Neighboring gene RNA polymerase II subunit M

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587574 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glutamine--tRNA ligase
Names
Dvir\GJ24549
Dvir\GJ24549-PA
dvir_GLEANR_9820

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587574.1 Reference DvirRS2

    Range
    6420101..6422532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002054573.3 → XP_002054609.1  probable glutamine--tRNA ligase

    See identical proteins and their annotated locations for XP_002054609.1

    UniProtKB/TrEMBL
    B4LZ26
    Related
    XP_002054609.1, XM_002054573.3
    Conserved Domains (5) summary
    PLN02859
    Location:10 → 781
    PLN02859; glutamine-tRNA ligase
    cd00807
    Location:270 → 574
    GlnRS_core; catalytic core domain of glutaminyl-tRNA synthetase
    pfam03950
    Location:572 → 759
    tRNA-synt_1c_C; tRNA synthetases class I (E and Q), anti-codon binding domain
    pfam04557
    Location:167 → 263
    tRNA_synt_1c_R2; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
    pfam04558
    Location:10 → 164
    tRNA_synt_1c_R1; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
Nucleotide Protein Strain
Heading Accession and Version

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