Mrps28 mitochondrial ribosomal protein S28 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Mrps28provided by MGI
Official Full Name: mitochondrial ribosomal protein S28provided by MGI
Primary source: MGI:MGI:1913480
See related: Ensembl:ENSMUSG00000040269 AllianceGenome:MGI:1913480
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 1500012D08Rik
Summary: Predicted to be involved in mitochondrial translation. Located in mitochondrion. Is expressed in several structures, including brain; early conceptus; genitourinary system; heart; and liver. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 47. Orthologous to human MRPS28 (mitochondrial ribosomal protein S28). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in adrenal adult (RPKM 47.0), liver E14.5 (RPKM 25.2) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 3; 3 A1

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
109	current	GRCm39 (GCF_000001635.27)	3	NC_000069.7 (8867206..8988917, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	3	NC_000069.6 (8802146..8923857, complement)

Chromosome 3 - NC_000069.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Homologs of the Mrps28 gene: The Mrps28 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, zebrafish, fruit fly, mosquito, and frog.
Orthologs from Annotation Pipeline: 381 organisms have orthologs with human gene Mrps28
Orthologs

Gene Ontology Provided by MGI

Process	Evidence Code	Pubs
involved_in mitochondrial translation	ISO Inferred from Sequence Orthology more info
involved_in mitochondrial translation	NAS Non-traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	NAS Non-traceable Author Statement more info	PubMed
part_of mitochondrial small ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info	PubMed
part_of mitochondrial small ribosomal subunit	NAS Non-traceable Author Statement more info	PubMed
located_in mitochondrion	HDA more info	PubMed
located_in mitochondrion	ISO Inferred from Sequence Orthology more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: 28S ribosomal protein S28, mitochondrial

Names: MRP-S28; S28mt

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.