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HTR5BP 5-hydroxytryptamine receptor 5B, pseudogene [ Homo sapiens (human) ]

Gene ID: 645694, updated on 17-Sep-2024

Summary

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Official Symbol
HTR5BPprovided by HGNC
Official Full Name
5-hydroxytryptamine receptor 5B, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:16291
See related
Ensembl:ENSG00000125631 AllianceGenome:HGNC:16291
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HTR5B; 5-HT5B; GPR134
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Genomic context

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See HTR5BP in Genome Data Viewer
Location:
2q14.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (117859427..117903680)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (118292751..118337038)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (118617003..118661256)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 195 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:118572589-118573124 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11892 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11893 Neighboring gene uncharacterized LOC107985939 Neighboring gene DEAD-box helicase 18 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:118615796-118616748 Neighboring gene uncharacterized LOC101929908 Neighboring gene coiled-coil domain containing 93 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11894 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11895 Neighboring gene RNA, 7SL, cytoplasmic 111, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Human 5-HT(5) receptors: the 5-HT(5A) receptor is functional but the 5-HT(5B) receptor was lost during mammalian evolution. Grailhe R, et al. Eur J Pharmacol, 2001 Apr 27. PMID 11343685
  2. GGA2 and RAB13 promote activity-dependent β1-integrin recycling. Sahgal P, et al. J Cell Sci, 2019 Jun 7. PMID 31076515

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Other Names

  • 5-hydroxytryptamine (serotonin) receptor 5 pseudogene
  • 5-hydroxytryptamine (serotonin) receptor 5A pseudogene
  • 5-hydroxytryptamine (serotonin) receptor 5B, pseudogene
  • G protein-coupled receptor 134

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008325.1 

    Range
    101..44354
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    117859427..117903680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    118292751..118337038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_003947.1: Suppressed sequence

    Description
    NR_003947.1: This RefSeq was permanently suppressed because there is insufficient evidence that this locus is transcribed.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases
Research Materials